Literature DB >> 1303770

Comparison of the X-ray structure of native rubredoxin from Pyrococcus furiosus with the NMR structure of the zinc-substituted protein.

P R Blake1, M W Day, B T Hsu, L Joshua-Tor, J B Park, D R Hare, M W Adams, D C Rees, M F Summers.   

Abstract

The three-dimensional X-ray structures of the oxidized and reduced forms of rubredoxin from Pyrococcus furiosus, determined at -161 degrees C, and the NMR structure of the zinc-substituted protein, determined in solution at 45 degrees C, are compared. The NMR and X-ray structures, which were determined independently, are very similar and lead to similar conclusions regarding the interactions that confer hyperthermostability.

Entities:  

Mesh：

Substances：

Year:  1992        PMID： 1303770      PMCID： PMC2142123          DOI： 10.1002/pro.5560011113

Source DB:  PubMed          Journal:  Protein Sci        ISSN： 0961-8368            Impact factor:   6.725


  2 in total

1.  X-ray crystal structures of the oxidized and reduced forms of the rubredoxin from the marine hyperthermophilic archaebacterium Pyrococcus furiosus.

Authors:  M W Day; B T Hsu; L Joshua-Tor; J B Park; Z H Zhou; M W Adams; D C Rees
Journal:  Protein Sci       Date:  1992-11       Impact factor: 6.725

2.  Solution-state structure by NMR of zinc-substituted rubredoxin from the marine hyperthermophilic archaebacterium Pyrococcus furiosus.

Authors:  P R Blake; J B Park; Z H Zhou; D R Hare; M W Adams; M F Summers
Journal:  Protein Sci       Date:  1992-11       Impact factor: 6.725
  2 in total
  10 in total

1.  Neutron crystallographic study on rubredoxin from Pyrococcus furiosus by BIX-3, a single-crystal diffractometer for biomacromolecules.

Authors:  Kazuo Kurihara; Ichiro Tanaka; Toshiyuki Chatake; Michael W W Adams; Francis E Jenney; Natalia Moiseeva; Robert Bau; Nobuo Niimura
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-22       Impact factor: 11.205

2.  Structural features of the metal binding site and dynamics of gallium putidaredoxin, a diamagnetic derivative of a Cys4Fe2S2 ferredoxin.

Authors:  S Kazanis; T C Pochapsky
Journal:  J Biomol NMR       Date:  1997-06       Impact factor: 2.835

3.  Comparing NMR and X-ray protein structure: Lindemann-like parameters and NMR disorder.

Authors:  Eshel Faraggi; A Keith Dunker; Joel L Sussman; Andrzej Kloczkowski
Journal:  J Biomol Struct Dyn       Date:  2017-08-08

4.  Stability and dynamics in a hyperthermophilic protein with melting temperature close to 200 degrees C.

Authors:  R Hiller; Z H Zhou; M W Adams; S W Englander
Journal:  Proc Natl Acad Sci U S A       Date:  1997-10-14       Impact factor: 11.205

5.  Modeling the structure of Pyrococcus furiosus rubredoxin by homology to other X-ray structures.

Authors:  J E Wampler; E A Bradley; D E Stewart; M W Adams
Journal:  Protein Sci       Date:  1993-04       Impact factor: 6.725

6.  Two-iron rubredoxin of Pseudomonas oleovorans: production, stability and characterization of the individual iron-binding domains by optical, CD and NMR spectroscopies.

Authors:  A Perry; L Y Lian; N S Scrutton
Journal:  Biochem J       Date:  2001-02-15       Impact factor: 3.857

7.  Growth requirements of hyperthermophilic sulfur-dependent heterotrophic archaea isolated from a shallow submarine geothermal system with reference to their essential amino acids.

Authors:  T Hoaki; M Nishijima; M Kato; K Adachi; S Mizobuchi; N Hanzawa; T Maruyama
Journal:  Appl Environ Microbiol       Date:  1994-08       Impact factor: 4.792

8.  Biochemical and structural characterization of a novel family of cystathionine beta-synthase domain proteins fused to a Zn ribbon-like domain.

Authors:  Michael Proudfoot; Stephen A Sanders; Alex Singer; Rongguang Zhang; Greg Brown; Andrew Binkowski; Linda Xu; Jonathan A Lukin; Alexey G Murzin; Andrzej Joachimiak; Cheryl H Arrowsmith; Aled M Edwards; Alexei V Savchenko; Alexander F Yakunin
Journal:  J Mol Biol       Date:  2007-11-01       Impact factor: 5.469

9.  Systematic comparison of crystal and NMR protein structures deposited in the protein data bank.

Authors:  Kresimir Sikic; Sanja Tomic; Oliviero Carugo
Journal:  Open Biochem J       Date:  2010-09-03

10.  Comprehensive analysis of the Co-structures of dipeptidyl peptidase IV and its inhibitor.

Authors:  Hiroyuki Nojima; Kazuhiko Kanou; Genki Terashi; Mayuko Takeda-Shitaka; Gaku Inoue; Koichiro Atsuda; Chihiro Itoh; Chie Iguchi; Hajime Matsubara
Journal:  BMC Struct Biol       Date:  2016-08-05
  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.