Literature DB >> 12952640

Evidence for the presence of a cellulase gene in the last common ancestor of bilaterian animals.

Nathan Lo1, Hirofumi Watanabe, Masahiro Sugimura.   

Abstract

Until recently, the textbook view of cellulose hydrolysis in animals was that gut-resident symbiotic organisms such as bacteria or unicellular eukaryotes are responsible for the cellulases produced. This view has been challenged by the characterization and sequencing of endogenous cellulase genes from some invertebrate animals, including plant-parasitic nematodes, arthropods and a mollusc. Most of these genes are completely unrelated in terms of sequence, and their evolutionary origins remain unclear. In the case of plant-parasitic nematodes, it has been suggested that their ancestor obtained a cellulase gene via horizontal gene transfer from a prokaryote, and similar suggestions have been made about a cellulase gene recently discovered in a sea squirt. To improve understanding about the evolution of animal cellulases, we searched for all known types of these enzymes in GenBank, and performed phylogenetic comparisons. Low phylogenetic resolution was found among most of the sequences examined, however, positional identity in the introns of cellulase genes from a termite, a sea squirt and an abalone provided compelling evidence that a similar gene was present in the last common ancestor of protostomes and deuterostomes. In a different enzyme family, cellulases from beetles and plant-parasitic nematodes were found to cluster together. This result questions the idea of lateral gene transfer into the ancestors of the latter, although statistical tests did not allow this possibility to be ruled out. Overall, our results suggest that at least one family of endogenous cellulases may be more widespread in animals than previously thought.

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Year:  2003        PMID: 12952640      PMCID: PMC1698037          DOI: 10.1098/rsbl.2003.0016

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  19 in total

Review 1.  Animal cellulases.

Authors:  H Watanabe; G Tokuda
Journal:  Cell Mol Life Sci       Date:  2001-08       Impact factor: 9.261

2.  A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach.

Authors:  S Whelan; N Goldman
Journal:  Mol Biol Evol       Date:  2001-05       Impact factor: 16.240

3.  A cellulase gene of termite origin.

Authors:  H Watanabe; H Noda; G Tokuda; N Lo
Journal:  Nature       Date:  1998-07-23       Impact factor: 49.962

4.  Endogenous cellulases in animals: isolation of beta-1, 4-endoglucanase genes from two species of plant-parasitic cyst nematodes.

Authors:  G Smant; J P Stokkermans; Y Yan; J M de Boer; T J Baum; X Wang; R S Hussey; F J Gommers; B Henrissat; E L Davis; J Helder; A Schots; J Bakker
Journal:  Proc Natl Acad Sci U S A       Date:  1998-04-28       Impact factor: 11.205

5.  Molecular cloning of cDNAs encoding a range of digestive enzymes from a phytophagous beetle, Phaedon cochleariae.

Authors:  C Girard; L Jouanin
Journal:  Insect Biochem Mol Biol       Date:  1999-12       Impact factor: 4.714

6.  Metazoan cellulase genes from termites: intron/exon structures and sites of expression.

Authors:  G Tokuda; N Lo; H Watanabe; M Slaytor; T Matsumoto; H Noda
Journal:  Biochim Biophys Acta       Date:  1999-10-28

Review 7.  Cellulose hydrolysis by bacteria and fungi.

Authors:  P Tomme; R A Warren; N R Gilkes
Journal:  Adv Microb Physiol       Date:  1995       Impact factor: 3.517

8.  New families in the classification of glycosyl hydrolases based on amino acid sequence similarities.

Authors:  B Henrissat; A Bairoch
Journal:  Biochem J       Date:  1993-08-01       Impact factor: 3.857

9.  Purification and cDNA cloning of a cellulase from abalone Haliotis discus hannai.

Authors:  Ken-ichi Suzuki; Takao Ojima; Kiyoyoshi Nishita
Journal:  Eur J Biochem       Date:  2003-02

Review 10.  The last common bilaterian ancestor.

Authors:  Douglas H Erwin; Eric H Davidson
Journal:  Development       Date:  2002-07       Impact factor: 6.868

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  14 in total

Review 1.  A review of feeding and nutrition of herbivorous land crabs: adaptations to low quality plant diets.

Authors:  Stuart M Linton; Peter Greenaway
Journal:  J Comp Physiol B       Date:  2007-02-06       Impact factor: 2.200

2.  Endogenous origin of endo-β-1,4-glucanase in common woodlouse Porcellio scaber (Crustacea, Isopoda).

Authors:  Rok Kostanjšek; Maša Milatovič; Jasna Strus
Journal:  J Comp Physiol B       Date:  2010-06-11       Impact factor: 2.200

Review 3.  Toward the functional analysis of uncultivable, symbiotic microorganisms in the termite gut.

Authors:  Yuichi Hongoh
Journal:  Cell Mol Life Sci       Date:  2011-03-02       Impact factor: 9.261

4.  Endogenous production of endo-beta-1,4-glucanase by decapod crustaceans.

Authors:  Stuart M Linton; Peter Greenaway; David W Towle
Journal:  J Comp Physiol B       Date:  2006-01-12       Impact factor: 2.200

5.  Identification of novel catalytic features of endo-beta-1,4-glucanase produced by mulberry longicorn beetle Apriona germari.

Authors:  Amtul Jamil Sami; Mohammed Kamran Haider
Journal:  J Zhejiang Univ Sci B       Date:  2007-10       Impact factor: 3.066

6.  Diversity of beetle genes encoding novel plant cell wall degrading enzymes.

Authors:  Yannick Pauchet; Paul Wilkinson; Ritika Chauhan; Richard H Ffrench-Constant
Journal:  PLoS One       Date:  2010-12-17       Impact factor: 3.240

7.  Carbohydrate metabolism genes and pathways in insects: insights from the honey bee genome.

Authors:  T Kunieda; T Fujiyuki; R Kucharski; S Foret; S A Ament; A L Toth; K Ohashi; H Takeuchi; A Kamikouchi; E Kage; M Morioka; M Beye; T Kubo; G E Robinson; R Maleszka
Journal:  Insect Mol Biol       Date:  2006-10       Impact factor: 3.585

8.  Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut.

Authors:  Matan Shelomi; W Cameron Jasper; Joel Atallah; Lynn S Kimsey; Brian R Johnson
Journal:  BMC Genomics       Date:  2014-10-21       Impact factor: 3.969

9.  Evolution of GHF5 endoglucanase gene structure in plant-parasitic nematodes: no evidence for an early domain shuffling event.

Authors:  Tina Kyndt; Annelies Haegeman; Godelieve Gheysen
Journal:  BMC Evol Biol       Date:  2008-11-03       Impact factor: 3.260

10.  Sequence mining and transcript profiling to explore cyst nematode parasitism.

Authors:  Axel A Elling; Makedonka Mitreva; Xiaowu Gai; John Martin; Justin Recknor; Eric L Davis; Richard S Hussey; Dan Nettleton; James P McCarter; Thomas J Baum
Journal:  BMC Genomics       Date:  2009-01-30       Impact factor: 3.969

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