Literature DB >> 12948674

Phage display as a tool for the directed evolution of enzymes.

Ana Fernandez-Gacio1, Marilyne Uguen, Jacques Fastrez.   

Abstract

Since its introduction in 1985, phage display has had a tremendous impact on the discovery of peptides that bind to a variety of receptors, the generation of binding sites within predefined scaffolds, and the creation of high-affinity antibodies without immunization. Its application to enzymology has required the development of techniques that couple enzymatic activity to selection protocols based on affinity chromatography. Here, we describe both indirect methods, using transition-state analogues and suicide substrates, and direct methods, using the ability of active phage-enzymes to transform substrate into product. The methods have been applied to large libraries for mechanistic-based studies and to generate variants with new or improved properties. In addition, such techniques have been successfully used to select catalytic antibodies and improve their catalytic efficiency.

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Year:  2003        PMID: 12948674     DOI: 10.1016/S0167-7799(03)00194-X

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN: 0167-7799            Impact factor:   19.536


  24 in total

1.  Mechanism-dependent selection of immunoglobulin gene library for obtaining covalent biocatalysts.

Authors:  A V Reshetnyak; M F Armentano; H C Morse; A Friboulet; S P Makker; A Tramontano; V D Knorre; A G Gabibov; N A Ponomarenko
Journal:  Dokl Biochem Biophys       Date:  2007 Jul-Aug       Impact factor: 0.788

Review 2.  Molecular modification of T4 bacteriophage proteins and its potential application - review.

Authors:  A Kurzepa; K Dabrowska; K Switała-Jeleń; A Górski
Journal:  Folia Microbiol (Praha)       Date:  2009-03-29       Impact factor: 2.099

Review 3.  Directed evolution drives the next generation of biocatalysts.

Authors:  Nicholas J Turner
Journal:  Nat Chem Biol       Date:  2009-08       Impact factor: 15.040

Review 4.  Virus-based chemical and biological sensing.

Authors:  Chuanbin Mao; Aihua Liu; Binrui Cao
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

5.  Crystallization and preliminary X-ray diffraction analysis of kanamycin-binding β-lactamase in complex with its ligand.

Authors:  Karen Van de Water; Sameh H Soror; Alexandre Wohlkonig; Nico A J van Nuland; Alexander N Volkov
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-05-26

6.  Ultrahigh-throughput screening in drop-based microfluidics for directed evolution.

Authors:  Jeremy J Agresti; Eugene Antipov; Adam R Abate; Keunho Ahn; Amy C Rowat; Jean-Christophe Baret; Manuel Marquez; Alexander M Klibanov; Andrew D Griffiths; David A Weitz
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-08       Impact factor: 11.205

Review 7.  Progress in phage display: evolution of the technique and its application.

Authors:  Tomaz Bratkovic
Journal:  Cell Mol Life Sci       Date:  2010-03       Impact factor: 9.261

Review 8.  Biomolecular engineering for nanobio/bionanotechnology.

Authors:  Teruyuki Nagamune
Journal:  Nano Converg       Date:  2017-04-24

9.  Assessing directed evolution methods for the generation of biosynthetic enzymes with potential in drug biosynthesis.

Authors:  David P Nannemann; William R Birmingham; Robert A Scism; Brian O Bachmann
Journal:  Future Med Chem       Date:  2011-05       Impact factor: 3.808

10.  Novel fluorescence-assisted whole-cell assay for engineering and characterization of proteases and their substrates.

Authors:  George Kostallas; Patrik Samuelson
Journal:  Appl Environ Microbiol       Date:  2010-09-17       Impact factor: 4.792

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