Literature DB >> 12947237

Halogen-bond geometry: a crystallographic database investigation of dihalogen complexes.

Carole Ouvrard1, Jean-Yves Le Questel, Michel Berthelot, Christian Laurence.   

Abstract

X-ray crystal structures of 141 halogen-bonded complexes Y-X.B formed between homo- and heteronuclear dihalogens Cl(2), Br(2), I(2), IBr and ICl with O, S, Se, N, P and As Lewis bases show remarkable and constant geometrical features. The metrics of the halogen bond found in the gas phase for simple complexes [Legon (1999a). Angew Chem. Int. Ed. Eng. 38, 2686-2714] is supported (i). in the solid state, (ii). for new Lewis acids (I(2) and IBr), (iii). for new basic centers (Se, As and =N-) and (iv). for more complicated bases. The Y-X...B arrangement is more linear than the corresponding Y-H...B hydrogen bond and the axis of the Y-X molecule lies in the plane of the B lone pair(s), with a preference for the putative lone-pair direction within that plane. However, exceptions to this lone-pair rule are found for sterically hindered thiocarbonyl and selenocarbonyl bases. A bond-order model of the halogen bond correctly predicts the observed correlation between the shortening of the X...B distance and the lengthening, deltad(Y-X), of the Y-X bond. The expectation that the solid-state geometric parameters d(X...B) and deltad(Y-X) reflect the strength of the interaction is supported by their significant relationships with the solution thermodynamic parameters of Lewis acidity and basicity strength, such as the Gibbs energy of 1:1 complexation of Lewis bases with diiodine. This analysis of halogen-bonded complexes in the solid state reinforces the similarities already known to exist between hydrogen and halogen bonding.

Entities:  

Year:  2003        PMID: 12947237     DOI: 10.1107/s0108768103011510

Source DB:  PubMed          Journal:  Acta Crystallogr B        ISSN: 0108-7681


  10 in total

1.  Noncovalent Halogen Bonding as a Mechanism for Gas-Phase Clustering.

Authors:  Christina Wegeberg; William A Donald; Christine J McKenzie
Journal:  J Am Soc Mass Spectrom       Date:  2017-07-17       Impact factor: 3.109

2.  Halogen bonds in biological molecules.

Authors:  Pascal Auffinger; Franklin A Hays; Eric Westhof; P Shing Ho
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-19       Impact factor: 11.205

Review 3.  Halogen bonding (X-bonding): a biological perspective.

Authors:  Matthew R Scholfield; Crystal M Vander Zanden; Megan Carter; P Shing Ho
Journal:  Protein Sci       Date:  2012-12-29       Impact factor: 6.725

4.  (5E)-2-[4,5-Bis(methyl-sulfan-yl)-1,3-dithiol-2-yl-idene]-5-(4-iodo-1,3-dithiol-2-yl-idene)-1,3-dithio-lan-4-one.

Authors:  Kazumasa Ueda; Kenji Yoza
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-31

5.  Evaluating the potential for halogen bonding in the oxyanion hole of ketosteroid isomerase using unnatural amino acid mutagenesis.

Authors:  Daniel A Kraut; Michael J Churchill; Phillip E Dawson; Daniel Herschlag
Journal:  ACS Chem Biol       Date:  2009-04-17       Impact factor: 5.100

6.  Reactions Between Chalcogen Donors and Dihalogens/Interalogens: Typology of Products and Their Characterization by FT-Raman Spectroscopy.

Authors:  Massimiliano Arca; M Carla Aragoni; Francesco A Devillanova; Alessandra Garau; Francesco Isaia; Vito Lippolis; Annalisa Mancini; Gaetano Verani
Journal:  Bioinorg Chem Appl       Date:  2006-12-31       Impact factor: 7.778

Review 7.  The Halogen Bond.

Authors:  Gabriella Cavallo; Pierangelo Metrangolo; Roberto Milani; Tullio Pilati; Arri Priimagi; Giuseppe Resnati; Giancarlo Terraneo
Journal:  Chem Rev       Date:  2016-01-26       Impact factor: 60.622

8.  Combined diffraction and density functional theory calculations of halogen-bonded cocrystal monolayers.

Authors:  Marco Sacchi; Adam Y Brewer; Stephen J Jenkins; Julia E Parker; Tomislav Friščić; Stuart M Clarke
Journal:  Langmuir       Date:  2013-11-20       Impact factor: 3.882

9.  Halogen bonds in some dihalogenated phenols: applications to crystal engineering.

Authors:  Arijit Mukherjee; Gautam R Desiraju
Journal:  IUCrJ       Date:  2013-10-18       Impact factor: 4.769

10.  Separation of halogenated benzenes enabled by investigation of halogen-π interactions with carbon materials.

Authors:  Eisuke Kanao; Takuya Morinaga; Takuya Kubo; Toyohiro Naito; Takatoshi Matsumoto; Tomoharu Sano; Hideshi Maki; Mingdi Yan; Koji Otsuka
Journal:  Chem Sci       Date:  2019-11-18       Impact factor: 9.825

  10 in total

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