Literature DB >> 12940718

2,3-difluorotyrosine at position 356 of ribonucleotide reductase R2: a probe of long-range proton-coupled electron transfer.

Cyril S Yee1, Michelle C Y Chang, Jie Ge, Daniel G Nocera, JoAnne Stubbe.   

Abstract

Escherichia coli class I ribonucleotide reductase catalyzes the conversion of ribonucleotides to deoxyribonucleotides and consists of two subunits: R1 and R2. R1 possesses the active site, while R2 harbors the essential diferric-tyrosyl radical (Y*) cofactor. The Y* on R2 is proposed to generate a transient thiyl radical on R1, 35 A distant, through amino acid radical intermediates. To study the putative long-range proton-coupled electron transfer (PCET), R2 (375 residues) was prepared semisynthetically using intein technology. Y356, a putative intermediate in the pathway, was replaced with 2,3-difluorotyrosine (F2Y, pKa = 7.8). pH rate profiles (pH 6.5-9.0) of wild-type and F2Y-R2 were very similar. Thus, a proton can be lost from the putative PCET pathway without affecting nucleotide reduction. The current model involving H* transfer is thus unlikely.

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Year:  2003        PMID: 12940718     DOI: 10.1021/ja036242r

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  28 in total

1.  Replacement of Y730 and Y731 in the alpha2 subunit of Escherichia coli ribonucleotide reductase with 3-aminotyrosine using an evolved suppressor tRNA/tRNA-synthetase pair.

Authors:  Mohammad R Seyedsayamdost; JoAnne Stubbe
Journal:  Methods Enzymol       Date:  2009       Impact factor: 1.600

Review 2.  Proton-coupled electron transfer: the mechanistic underpinning for radical transport and catalysis in biology.

Authors:  Steven Y Reece; Justin M Hodgkiss; JoAnne Stubbe; Daniel G Nocera
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2006-08-29       Impact factor: 6.237

3.  Incorporation of fluorotyrosines into ribonucleotide reductase using an evolved, polyspecific aminoacyl-tRNA synthetase.

Authors:  Ellen C Minnihan; Douglas D Young; Peter G Schultz; JoAnne Stubbe
Journal:  J Am Chem Soc       Date:  2011-09-21       Impact factor: 15.419

4.  Conformational Motions and Water Networks at the α/β Interface in E. coli Ribonucleotide Reductase.

Authors:  Clorice R Reinhardt; Pengfei Li; Gyunghoon Kang; JoAnne Stubbe; Catherine L Drennan; Sharon Hammes-Schiffer
Journal:  J Am Chem Soc       Date:  2020-07-28       Impact factor: 15.419

5.  Glutamate 350 Plays an Essential Role in Conformational Gating of Long-Range Radical Transport in Escherichia coli Class Ia Ribonucleotide Reductase.

Authors:  Kanchana Ravichandran; Ellen C Minnihan; Qinghui Lin; Kenichi Yokoyama; Alexander T Taguchi; Jimin Shao; Daniel G Nocera; JoAnne Stubbe
Journal:  Biochemistry       Date:  2017-02-02       Impact factor: 3.162

6.  Kinetics of radical intermediate formation and deoxynucleotide production in 3-aminotyrosine-substituted Escherichia coli ribonucleotide reductases.

Authors:  Ellen C Minnihan; Mohammad R Seyedsayamdost; Ulla Uhlin; JoAnne Stubbe
Journal:  J Am Chem Soc       Date:  2011-05-25       Impact factor: 15.419

7.  Investigation of in vivo roles of the C-terminal tails of the small subunit (ββ') of Saccharomyces cerevisiae ribonucleotide reductase: contribution to cofactor formation and intersubunit association within the active holoenzyme.

Authors:  Yan Zhang; Xiuxiang An; Joanne Stubbe; Mingxia Huang
Journal:  J Biol Chem       Date:  2013-03-25       Impact factor: 5.157

8.  ENDOR spectroscopy and DFT calculations: evidence for the hydrogen-bond network within α2 in the PCET of E. coli ribonucleotide reductase.

Authors:  Tomislav Argirević; Christoph Riplinger; JoAnne Stubbe; Frank Neese; Marina Bennati
Journal:  J Am Chem Soc       Date:  2012-10-16       Impact factor: 15.419

9.  Expressed protein ligation using an N-terminal cysteine containing fragment generated in vivo from a pelB fusion protein.

Authors:  Paul S Hauser; Robert O Ryan
Journal:  Protein Expr Purif       Date:  2007-04-10       Impact factor: 1.650

10.  Semisynthesis and segmental isotope labeling of the apoE3 N-terminal domain using expressed protein ligation.

Authors:  Paul S Hauser; Vincent Raussens; Taichi Yamamoto; Gezman E Abdullahi; Paul M M Weers; Brian D Sykes; Robert O Ryan
Journal:  J Lipid Res       Date:  2008-12-19       Impact factor: 5.922

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