Literature DB >> 12939792

[Initial analysis of complete genome sequences of SARS coronavirus].

Yun-Jia Chen1, Ge Gao, Yi-Ming Bao, Rodrigo Lopez, Jian-Min Wu, Tao Cai, Zhi-Qiang Ye, Xiao-Cheng Gu, Jing-Chu Luo.   

Abstract

Multiple sequence alignment among 12 complete SARS coronavirus (SARS-CoV) sequences reveals that the major parts of 29708 b of the genomes have 99.82% identical bases. Forty two nucleotide mismatches were found in addition to the five and six gaps in two genomes. Among them, 28 mismatches result in changes of amino acid in the encoded proteins. Analysis of the changes implies possible effect on the Spike and Membrane protein of the virus, while most of the other changes seem not very significant to alter the structure and function of the proteins. These results have been released on the anti-sars web site maintained by the Centre of Bioinformatics, Peking University (antisars.cbi.pku.edu.cn) and may be of help for further experimental study.

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Year:  2003        PMID: 12939792

Source DB:  PubMed          Journal:  Yi Chuan Xue Bao        ISSN: 0379-4172


  2 in total

1.  Polymorphism of SARS-CoV genomes.

Authors:  Lei Shang; Yan Qi; Qi-Yu Bao; Wei Tian; Jian-Cheng Xu; Ming-Guang Feng; Huan-Ming Yang
Journal:  Yi Chuan Xue Bao       Date:  2006-04

2.  A universal microarray for detection of SARS coronavirus.

Authors:  Wei-Hong Long; Hua-Sheng Xiao; Xiao-Mei Gu; Qing-Hua Zhang; Hong-Jun Yang; Guo-Ping Zhao; Jian-Hua Liu
Journal:  J Virol Methods       Date:  2004-10       Impact factor: 2.014

  2 in total

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