Literature DB >> 12938186

An image analysis-based approach for automated counting of cancer cell nuclei in tissue sections.

Constantinos G Loukas1, George D Wilson, Borivoj Vojnovic, Alf Linney.   

Abstract

BACKGROUND: Semiquantitative evaluation and manual cell counting are the commonly used procedures to assess positive staining of molecular markers in tissue sections. Manual counting is also a laborious task in which consistent objectivity is difficult to achieve. Recently, image analysis has been explored, but the studies reported were limited to histological images acquired at high magnification and containing uniformly stained cells.
METHODS: The analyzed material consisted of histological sections from different squamous cell cancers that had stained for proliferation using Ki-67 and cyclin A detection. The first step of the method was based on detecting the overall number of cells irrespective to their stain, using second-order edge detection methodology. Then proliferating cells were located using principal component analysis (PCA) of the color image, combined with histogram thresholding.
RESULTS: The algorithms' performances were validated on tissue section images encountered in routine clinical practice by comparison with objective measures of performance and manual cell identification. The algorithms correlated closely with manual counting of all cells (r(2) = 0.96-0.97) and stained cells (4-7% cell count error).
CONCLUSIONS: Cell counting in complex large-scale histological images could be applied in routine practice using edge and color information. The proposed technique provides several benefits, such as speed of analysis, consistency, and automation. Moreover, it is faster than human observation and could replace the laborious task of manual cell counting. Copyright 2003 Wiley-Liss, Inc.

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Year:  2003        PMID: 12938186     DOI: 10.1002/cyto.a.10060

Source DB:  PubMed          Journal:  Cytometry A        ISSN: 1552-4922            Impact factor:   4.355


  20 in total

1.  An automated method for cell detection in zebrafish.

Authors:  Tianming Liu; Gang Li; Jingxin Nie; Ashley Tarokh; Xiaobo Zhou; Lei Guo; Jarema Malicki; Weiming Xia; Stephen T C Wong
Journal:  Neuroinformatics       Date:  2008-02-21

2.  Automated quantification of nuclear immunohistochemical markers with different complexity.

Authors:  Carlos López; Marylène Lejeune; María Teresa Salvadó; Patricia Escrivà; Ramón Bosch; Lluis E Pons; Tomás Alvaro; Jordi Roig; Xavier Cugat; Jordi Baucells; Joaquín Jaén
Journal:  Histochem Cell Biol       Date:  2008-01-03       Impact factor: 4.304

3.  Effects of image compression on automatic count of immunohistochemically stained nuclei in digital images.

Authors:  Carlos López; Marylène Lejeune; Patricia Escrivà; Ramón Bosch; Maria Teresa Salvadó; Lluis E Pons; Jordi Baucells; Xavier Cugat; Tomás Alvaro; Joaquín Jaén
Journal:  J Am Med Inform Assoc       Date:  2008-08-28       Impact factor: 4.497

4.  An advanced image analysis tool for the quantification and characterization of breast cancer in microscopy images.

Authors:  Theodosios Goudas; Ilias Maglogiannis
Journal:  J Med Syst       Date:  2015-02-14       Impact factor: 4.460

5.  Polarization-resolved second-harmonic generation microscopy as a method to visualize protein-crystal domains.

Authors:  Emma L DeWalt; Victoria J Begue; Judith A Ronau; Shane Z Sullivan; Chittaranjan Das; Garth J Simpson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-12-20

6.  VOTING-BASED SEGMENTATION OF OVERLAPPING NUCLEI IN CLARITY IMAGES.

Authors:  Benjamin Quachtran; Luis de la Torre Ubieta; Marianna Yusupova; Daniel H Geschwind; David W Shattuck
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2018-05-24

7.  High-throughput histopathological image analysis via robust cell segmentation and hashing.

Authors:  Xiaofan Zhang; Fuyong Xing; Hai Su; Lin Yang; Shaoting Zhang
Journal:  Med Image Anal       Date:  2015-11-09       Impact factor: 8.545

8.  Automatic segmentation of cell nuclei in bladder and skin tissue for karyometric analysis.

Authors:  Vrushali R Korde; Hubert Bartels; Jennifer Barton; James Ranger-Moore
Journal:  Anal Quant Cytol Histol       Date:  2009-04       Impact factor: 0.302

9.  Aryl hydrocarbon receptor deletion in cerebellar granule neuron precursors impairs neurogenesis.

Authors:  Daniel P Dever; Zachariah O Adham; Bryan Thompson; Matthieu Genestine; Jonathan Cherry; John A Olschowka; Emanuel DiCicco-Bloom; Lisa A Opanashuk
Journal:  Dev Neurobiol       Date:  2015-08-17       Impact factor: 3.964

10.  Galectin-3 overexpression in invasive laryngeal carcinoma, assessed by computer-assisted analysis.

Authors:  Fabiana Alves Miranda; Marcela K Hassumi; Marcia C M Guimarães; Renata T Simões; Tarsia G A Silva; Régia C P Lira; Ana M Rocha; Celso T Mendes; Eduardo A Donadi; Christiane P Soares; Edson G Soares
Journal:  J Histochem Cytochem       Date:  2009-03-30       Impact factor: 2.479

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