Literature DB >> 12935899

Noise in gene expression as the source of non-genetic individuality in the chemotactic response of Escherichia coli.

M D Levin1.   

Abstract

A deterministic computer model of the signal transduction pathway mediating bacterial chemotaxis was used to examine the variation in both unstimulated swimming behaviour and adaptation time to stimuli in clonal populations of cells. Copy numbers of proteins in the pathway were computed from a simplified model of transcription and translation that predicts greater-than-Poissonian statistics. Simulated and experimental individuality data could be brought into good agreement on varying the noise strength of the protein copy number distributions. In the simulations, all the proteins in the pathway are involved to a significant degree in the appearance of phenotypic diversity, although there is a modest decrease in influence with increasing copy number.

Entities:  

Mesh:

Year:  2003        PMID: 12935899     DOI: 10.1016/s0014-5793(03)00857-3

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  14 in total

1.  A stochastic version of corticosteriod pharmacogenomic model.

Authors:  Xiaohong Qi
Journal:  AAPS J       Date:  2005-06-23       Impact factor: 4.009

2.  Cellular asymmetry and individuality in directional sensing.

Authors:  Azadeh Samadani; Jerome Mettetal; Alexander van Oudenaarden
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-24       Impact factor: 11.205

3.  A rigorous framework for multiscale simulation of stochastic cellular networks.

Authors:  Michael W Chevalier; Hana El-Samad
Journal:  J Chem Phys       Date:  2009-08-07       Impact factor: 3.488

4.  Multiscale Modeling of Cellular Epigenetic States: Stochasticity in Molecular Networks, Chromatin Folding in Cell Nuclei, and Tissue Pattern Formation of Cells.

Authors:  Jie Liang; Youfang Cao; Gamze Gursoy; Hammad Naveed; Anna Terebus; Jieling Zhao
Journal:  Crit Rev Biomed Eng       Date:  2015

5.  Hydrogen photoproduction in green algae Chlamydomonas reinhardtii sustainable over 2 weeks with the original cell culture without supply of fresh cells nor exchange of the whole culture medium.

Authors:  Takafumi Yagi; Kyohei Yamashita; Norihide Okada; Takumi Isono; Daisuke Momose; Shigeru Mineki; Eiji Tokunaga
Journal:  J Plant Res       Date:  2016-04-15       Impact factor: 2.629

6.  Tuning and controlling gene expression noise in synthetic gene networks.

Authors:  Kevin F Murphy; Rhys M Adams; Xiao Wang; Gábor Balázsi; James J Collins
Journal:  Nucleic Acids Res       Date:  2010-03-08       Impact factor: 16.971

7.  E. coli superdiffusion and chemotaxis-search strategy, precision, and motility.

Authors:  F Matthäus; M Jagodic; J Dobnikar
Journal:  Biophys J       Date:  2009-08-19       Impact factor: 4.033

8.  TGF-beta1 reduces the heterogeneity of astrocytic cyclooxygenase-2 and nitric oxide synthase-2 gene expression in a stimulus-independent manner.

Authors:  Mary E Hamby; James A Hewett; Sandra J Hewett
Journal:  Prostaglandins Other Lipid Mediat       Date:  2007-12-08       Impact factor: 3.072

9.  On the origin and characteristics of noise-induced Lévy walks of E. coli.

Authors:  Franziska Matthäus; Mario S Mommer; Tine Curk; Jure Dobnikar
Journal:  PLoS One       Date:  2011-04-08       Impact factor: 3.240

10.  Changing cellular location of CheZ predicted by molecular simulations.

Authors:  Karen Lipkow
Journal:  PLoS Comput Biol       Date:  2006-04-28       Impact factor: 4.475

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.