Literature DB >> 12933638

Empirical Bayes Gibbs sampling.

G Casella1.   

Abstract

The wide applicability of Gibbs sampling has increased the use of more complex and multi-level hierarchical models. To use these models entails dealing with hyperparameters in the deeper levels of a hierarchy. There are three typical methods for dealing with these hyperparameters: specify them, estimate them, or use a 'flat' prior. Each of these strategies has its own associated problems. In this paper, using an empirical Bayes approach, we show how the hyperparameters can be estimated in a way that is both computationally feasible and statistically valid.

Year:  2001        PMID: 12933638     DOI: 10.1093/biostatistics/2.4.485

Source DB:  PubMed          Journal:  Biostatistics        ISSN: 1465-4644            Impact factor:   5.899


  19 in total

1.  Simultaneous fine mapping of multiple closely linked quantitative trait Loci using combined linkage disequilibrium and linkage with a general pedigree.

Authors:  S H Lee; J H J Van der Werf
Journal:  Genetics       Date:  2006-06-04       Impact factor: 4.562

2.  Fine mapping of multiple interacting quantitative trait loci using combined linkage disequilibrium and linkage information.

Authors:  Sang Hong Lee; J H Julius van der Werf
Journal:  J Zhejiang Univ Sci B       Date:  2007-11       Impact factor: 3.066

3.  TIGAR: An Improved Bayesian Tool for Transcriptomic Data Imputation Enhances Gene Mapping of Complex Traits.

Authors:  Sini Nagpal; Xiaoran Meng; Michael P Epstein; Lam C Tsoi; Matthew Patrick; Greg Gibson; Philip L De Jager; David A Bennett; Aliza P Wingo; Thomas S Wingo; Jingjing Yang
Journal:  Am J Hum Genet       Date:  2019-06-20       Impact factor: 11.025

4.  A Bayesian Approach for Graph-constrained Estimation for High-dimensional Regression.

Authors:  Hokeun Sun; Hongzhe Li
Journal:  Int J Syst Synth Biol       Date:  2010

Review 5.  Computational approaches for discovery of mutational signatures in cancer.

Authors:  Adrian Baez-Ortega; Kevin Gori
Journal:  Brief Bioinform       Date:  2019-01-18       Impact factor: 11.622

6.  High-Dimensional Confounding Adjustment Using Continuous Spike and Slab Priors.

Authors:  Joseph Antonelli; Giovanni Parmigiani; Francesca Dominici
Journal:  Bayesian Anal       Date:  2019-06-11       Impact factor: 3.728

7.  Frailty Modeling via the Empirical Bayes Hastings Sampler.

Authors:  Richard A Levine; Juanjuan Fan; Pamela Ohman Strickland; Shaban Demirel
Journal:  Comput Stat Data Anal       Date:  2011-10-01       Impact factor: 1.681

8.  Bayesian hierarchical structured variable selection methods with application to MIP studies in breast cancer.

Authors:  Lin Zhang; Veerabhadran Baladandayuthapani; Bani K Mallick; Ganiraju C Manyam; Patricia A Thompson; Melissa L Bondy; Kim-Anh Do
Journal:  J R Stat Soc Ser C Appl Stat       Date:  2014-08       Impact factor: 1.864

9.  BAYESIAN SHRINKAGE METHODS FOR PARTIALLY OBSERVED DATA WITH MANY PREDICTORS.

Authors:  Philip S Boonstra; Bhramar Mukherjee; Jeremy Mg Taylor
Journal:  Ann Appl Stat       Date:  2013-12-01       Impact factor: 2.083

10.  Bayesian Genome-wide TWAS Method to Leverage both cis- and trans-eQTL Information through Summary Statistics.

Authors:  Justin M Luningham; Junyu Chen; Shizhen Tang; Philip L De Jager; David A Bennett; Aron S Buchman; Jingjing Yang
Journal:  Am J Hum Genet       Date:  2020-09-21       Impact factor: 11.025

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