Literature DB >> 12927530

Mutation landscapes.

Akira Sasaki1, Martin A Nowak.   

Abstract

A traditional picture of evolutionary dynamics with constant fitness is that of genomes living in sequence space and adapting on fitness landscapes. Mutation rates are considered to be constant or externally regulated. If, however, we take into account that genomes also encode for enzymes that perform replication and error correction, then individual genomes not only have a specific replication rate (fitness), but also a specific mutation rate. This leads to the concept of a mutation landscape. We explore evolution on mutation landscapes. Localization in pure mutation landscapes is only possible under extremely restrictive conditions. Coupling of mutation landscapes and fitness landscapes leads to localization and hence adaptation and evolution. We analyse how mutation landscapes facilitate localization in fitness landscapes and vice versa. Finally, we show that for mutation landscapes, at equilibrium, with constant environment, there is not necessarily selection for the minimum mutation rate. Instead, the target of selection is an optimum distribution of mutation rates, a 'mutational quasispecies'.

Mesh:

Year:  2003        PMID: 12927530     DOI: 10.1016/s0022-5193(03)00161-9

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  8 in total

1.  Complete genetic linkage can subvert natural selection.

Authors:  Philip J Gerrish; Alexandre Colato; Alan S Perelson; Paul D Sniegowski
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-03       Impact factor: 11.205

2.  Exact solution of the Eigen model with general fitness functions and degradation rates.

Authors:  David B Saakian; Chin-Kun Hu
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-20       Impact factor: 11.205

3.  Functional information and the emergence of biocomplexity.

Authors:  Robert M Hazen; Patrick L Griffin; James M Carothers; Jack W Szostak
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-09       Impact factor: 11.205

4.  Frequency-dependent fitness induces multistability in coevolutionary dynamics.

Authors:  Hinrich Arnoldt; Marc Timme; Stefan Grosskinsky
Journal:  J R Soc Interface       Date:  2012-08-08       Impact factor: 4.118

5.  The relationship between the error catastrophe, survival of the flattest, and natural selection.

Authors:  Héctor Tejero; Arturo Marín; Francisco Montero
Journal:  BMC Evol Biol       Date:  2011-01-04       Impact factor: 3.260

6.  Effect of the SOS response on the mean fitness of unicellular populations: a quasispecies approach.

Authors:  Amit Kama; Emmanuel Tannenbaum
Journal:  PLoS One       Date:  2010-11-30       Impact factor: 3.240

7.  Repeatability of evolution on epistatic landscapes.

Authors:  Benedikt Bauer; Chaitanya S Gokhale
Journal:  Sci Rep       Date:  2015-05-05       Impact factor: 4.379

8.  Informational complexity and functional activity of RNA structures.

Authors:  James M Carothers; Stephanie C Oestreich; Jonathan H Davis; Jack W Szostak
Journal:  J Am Chem Soc       Date:  2004-04-28       Impact factor: 15.419

  8 in total

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