Literature DB >> 12923108

FNR-mediated oxygen-responsive regulation of the nrdDG operon of Escherichia coli.

T Boston1, T Atlung.   

Abstract

Transcription of the nrdDG operon, which encodes the class III nucleotide reductase, which is only active under anaerobic conditions, was strongly induced after a shift to anaerobiosis. The induction was completely dependent on the transcriptional activator FNR and was independent of the ArcA-ArcB two-component response regulator system. The nrdD transcript start site was mapped to a position immediately downstream of two FNR binding sites. Transcription of the other two nucleotide reductase operons, nrdAB and nrdEF, did not respond to oxygen conditions in a wild-type background, but nrdAB expression was increased in the fnr mutant under anaerobic conditions.

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Year:  2003        PMID: 12923108      PMCID: PMC180968          DOI: 10.1128/JB.185.17.5310-5313.2003

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  22 in total

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Authors:  T Atlung; H V Nielsen; F G Hansen
Journal:  Mol Genet Genomics       Date:  2001-11-21       Impact factor: 3.291

3.  Expression analysis of the nrdHIEF operon from Escherichia coli. Conditions that trigger the transcript level in vivo.

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Journal:  J Biol Chem       Date:  2001-02-23       Impact factor: 5.157

4.  Effect of IciA protein on the expression of the nrd gene encoding ribonucleoside diphosphate reductase in E. coli.

Authors:  J S Han; H S Kwon; J B Yim; D S Hwang
Journal:  Mol Gen Genet       Date:  1998-10

5.  Measurement of in vivo expression of nrdA and nrdB genes of Escherichia coli by using lacZ gene fusions.

Authors:  I Gibert; S Calero; J Barbé
Journal:  Mol Gen Genet       Date:  1990-02

Review 6.  Linkage map of Escherichia coli K-12, edition 8.

Authors:  B J Bachmann
Journal:  Microbiol Rev       Date:  1990-06

7.  Site-specific endonucleolytic cleavages and the regulation of stability of E. coli ompA mRNA.

Authors:  O Melefors; A von Gabain
Journal:  Cell       Date:  1988-03-25       Impact factor: 41.582

Review 8.  FNR and its role in oxygen-regulated gene expression in Escherichia coli.

Authors:  S Spiro; J R Guest
Journal:  FEMS Microbiol Rev       Date:  1990-08       Impact factor: 16.408

9.  Carbon metabolism regulates expression of the pfl (pyruvate formate-lyase) gene in Escherichia coli.

Authors:  L J Rasmussen; P L Møller; T Atlung
Journal:  J Bacteriol       Date:  1991-10       Impact factor: 3.490

10.  Regulation of the operon encoding ribonucleotide reductase in Escherichia coli: evidence for both positive and negative control.

Authors:  C K Tuggle; J A Fuchs
Journal:  EMBO J       Date:  1986-05       Impact factor: 11.598

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  14 in total

1.  H-NS is a novel transcriptional modulator of the ribonucleotide reductase genes in Escherichia coli.

Authors:  Maria del mar Cendra; Antonio Juárez; Cristina Madrid; Eduard Torrents
Journal:  J Bacteriol       Date:  2013-07-19       Impact factor: 3.490

2.  The Bacillus subtilis nrdEF genes, encoding a class Ib ribonucleotide reductase, are essential for aerobic and anaerobic growth.

Authors:  Elisabeth Härtig; Anja Hartmann; Manuela Schätzle; Alessandra M Albertini; Dieter Jahn
Journal:  Appl Environ Microbiol       Date:  2006-08       Impact factor: 4.792

3.  Functional analysis of the Streptomyces coelicolor NrdR ATP-cone domain: role in nucleotide binding, oligomerization, and DNA interactions.

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Journal:  J Bacteriol       Date:  2008-12-01       Impact factor: 3.490

4.  NrdR controls differential expression of the Escherichia coli ribonucleotide reductase genes.

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Journal:  J Bacteriol       Date:  2007-05-11       Impact factor: 3.490

5.  Delineation of the Salmonella enterica serovar Typhimurium HilA regulon through genome-wide location and transcript analysis.

Authors:  Inge M V Thijs; Sigrid C J De Keersmaecker; Abeer Fadda; Kristof Engelen; Hui Zhao; Michael McClelland; Kathleen Marchal; Jos Vanderleyden
Journal:  J Bacteriol       Date:  2007-05-04       Impact factor: 3.490

6.  Metabolic shift of Escherichia coli under salt stress in the presence of glycine betaine.

Authors:  A Metris; S M George; F Mulholland; A T Carter; J Baranyi
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7.  Biofilm modifies expression of ribonucleotide reductase genes in Escherichia coli.

Authors:  Maria del Mar Cendra; Antonio Juárez; Eduard Torrents
Journal:  PLoS One       Date:  2012-09-26       Impact factor: 3.240

8.  Differential producibility analysis (DPA) of transcriptomic data with metabolic networks: deconstructing the metabolic response of M. tuberculosis.

Authors:  Bhushan K Bonde; Dany J V Beste; Emma Laing; Andrzej M Kierzek; Johnjoe McFadden
Journal:  PLoS Comput Biol       Date:  2011-06-30       Impact factor: 4.475

9.  Comparative genomic analysis of regulation of anaerobic respiration in ten genomes from three families of gamma-proteobacteria (Enterobacteriaceae, Pasteurellaceae, Vibrionaceae).

Authors:  Dmitry A Ravcheev; Anna V Gerasimova; Andrey A Mironov; Mikhail S Gelfand
Journal:  BMC Genomics       Date:  2007-02-21       Impact factor: 3.969

10.  A reduction in ribonucleotide reductase activity slows down the chromosome replication fork but does not change its localization.

Authors:  Ingvild Odsbu; Kirsten Skarstad
Journal:  PLoS One       Date:  2009-10-28       Impact factor: 3.240

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