Literature DB >> 12919139

Identification of three novel SEDL mutations, including mutation in the rare, non-canonical splice site of exon 4.

M A Shaw1, N Brunetti-Pierri, L Kádasi, V Kovácová, L Van Maldergem, D De Brasi, M Salerno, J Gécz.   

Abstract

Spondyloepiphyseal dysplasia tarda (SEDT) is an X-linked recessive disorder, characterized by disproportionately short stature and degenerative joint disease, which manifests in the early teens. The gene responsible for SED tarda, SEDL, has been identified in Xp22. We report on three novel SEDL mutations. The first mutation is in the rare, non-canonical 5' splice site of intron 4 (IVS4+4T>C) in an Italian family. Reverse transcription-polymerase chain reaction (RT-PCR) analysis has revealed that this mutation causes alternative splicing of exon 5, and, as a consequence, inclusion of exon 4b sequence. This gives rise to an altered, truncated SEDL protein. We also describe two new deletions: one is a 4-bp deletion in exon 6 [333-336del(GAAT)], identified in a Slovak patient with SEDT, and one is a 1.335-kb deletion (in5/ex6del), found in a Belgian patient. The identification of these novel mutations in SEDL adds to the spectrum of 30 mutations previously identified. A short summary of all currently known SEDL gene mutations is presented.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12919139     DOI: 10.1034/j.1399-0004.2003.00132.x

Source DB:  PubMed          Journal:  Clin Genet        ISSN: 0009-9163            Impact factor:   4.438


  14 in total

1.  EAnnot: a genome annotation tool using experimental evidence.

Authors:  Li Ding; Aniko Sabo; Nicolas Berkowicz; Rekha R Meyer; Yoram Shotland; Mark R Johnson; Kymberlie H Pepin; Richard K Wilson; John Spieth
Journal:  Genome Res       Date:  2004-12       Impact factor: 9.043

2.  A novel RNA-splicing mutation in TRAPPC2 gene causing x-linked spondyloepiphyseal dysplasia tarda in a large Chinese family.

Authors:  Hong Guo; Xueqing Xu; Kai Wang; Bo Zhang; Guohong Deng; Yan Wang; Yun Bai
Journal:  J Genet       Date:  2009-04       Impact factor: 1.166

3.  Noncanonical and canonical splice sites: a novel mutation at the rare noncanonical splice-donor cut site (IVS4+1A>G) of SEDL causes variable splicing isoforms in X-linked spondyloepiphyseal dysplasia tarda.

Authors:  Feng Xiong; Jianjun Gao; Jun Li; Yun Liu; Guoyin Feng; Wenli Fang; Hongfen Chang; Jiang Xie; Haitao Zheng; Tingyu Li; Lin He
Journal:  Eur J Hum Genet       Date:  2008-11-12       Impact factor: 4.246

Review 4.  The TRAPP complex: insights into its architecture and function.

Authors:  Michael Sacher; Yeon-Gil Kim; Arnon Lavie; Byung-Ha Oh; Nava Segev
Journal:  Traffic       Date:  2008-10-14       Impact factor: 6.215

5.  C4orf41 and TTC-15 are mammalian TRAPP components with a role at an early stage in ER-to-Golgi trafficking.

Authors:  P James Scrivens; Baraa Noueihed; Nassim Shahrzad; Sokunthear Hul; Stephanie Brunet; Michael Sacher
Journal:  Mol Biol Cell       Date:  2011-04-27       Impact factor: 4.138

Review 6.  Therapeutic Modulation of RNA Splicing in Malignant and Non-Malignant Disease.

Authors:  Ettaib El Marabti; Omar Abdel-Wahab
Journal:  Trends Mol Med       Date:  2021-05-13       Impact factor: 15.272

7.  A novel deletion variant in TRAPPC2 causes spondyloepiphyseal dysplasia tarda in a five-generation Chinese family.

Authors:  Cai Zhang; Caiqi Du; Juan Ye; Feng Ye; Renfa Wang; Xiaoping Luo; Yan Liang
Journal:  BMC Med Genet       Date:  2020-05-29       Impact factor: 2.103

8.  SEDLIN forms homodimers: characterisation of SEDLIN mutations and their interactions with transcription factors MBP1, PITX1 and SF1.

Authors:  Jeshmi Jeyabalan; M Andrew Nesbit; Juris Galvanovskis; Richard Callaghan; Patrik Rorsman; Rajesh V Thakker
Journal:  PLoS One       Date:  2010-05-14       Impact factor: 3.240

Review 9.  The significant other: splicing by the minor spliceosome.

Authors:  Janne J Turunen; Elina H Niemelä; Bhupendra Verma; Mikko J Frilander
Journal:  Wiley Interdiscip Rev RNA       Date:  2012-10-16       Impact factor: 9.957

10.  Novel loss-of-function variants of TRAPPC2 manifesting X-linked spondyloepiphyseal dysplasia tarda: report of two cases.

Authors:  Joon Yeon Won; Dayeon Kim; Seon Young Park; Hye Ran Lee; Jong-Seok Lim; Jong Hoon Park; Mi Hyun Song; Hae Ryong Song; Ok-Hwa Kim; Yonghwan Kim; Tae-Joon Cho
Journal:  BMC Med Genet       Date:  2019-05-03       Impact factor: 2.103

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.