Literature DB >> 12898137

Characterization of eight Y-STR loci and haplotypes in a Chinese Han population.

Jian Pin Tang1, Yi Ping Hou, Ying Bi Li, Jin Wu, Jian Zhang, Hai Jun Zhang.   

Abstract

In this study we analyzed the eight Y-STR loci, DYS443, DYS444, DYS448, DYS453, DYS455, DYS456, DYS457 (DYS437) and DYS458, investigated haplotype distributions of these Y-STR loci in a Chinese Han population, and sequenced alleles of the eight loci for clarifying the structure. Extracted DNA was amplified by PCR and the PCR products were analyzed by non-denaturing horizontal polyacrylamide gel electrophoresis with a discontinuous buffer system. Alleles were sequenced on an ABI 3700 using a Dye Terminator Cycle sequencing kit. DYS443, DYS453, DYS455 and DYS456 were found to be simple repeat systems, while DYS444, DYS448, DYS457 (DYS437) and DYS458 were complex repeat systems. The gene diversities of DYS443, DYS444, DYS448, DYS453, DYS455, DYS456, DYS457 (DYS437) and DYS458 were 0.7742, 0.7671, 0.7453, 0.3545, 0.0549, 0.6988, 0.6148 and 0.8213, respectively. The haplotype diversity for 8 Y-STR loci was 0.9996, and the discrimination capacity was 0.9815. The results indicate that these eight loci are useful Y-linked markers for forensic applications.

Entities:  

Mesh:

Year:  2003        PMID: 12898137     DOI: 10.1007/s00414-003-0371-x

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  18 in total

1.  Y-chromosome multiplexes and their potential for the DNA profiling of Koreans.

Authors:  D J Shin; H J Jin; K D Kwak; J W Choi; M S Han; P W Kang; S K Choi; W Kim
Journal:  Int J Legal Med       Date:  2001-10       Impact factor: 2.686

2.  Identification and characterization of two novel human polymorphic STRs on the Y chromosome.

Authors:  R Iida; E Tsubota; T Matsuki
Journal:  Int J Legal Med       Date:  2001-08       Impact factor: 2.686

3.  Haplotype frequencies of nine Y-chromosome STR loci in the Taiwanese Han population.

Authors:  Li-Chin Tsai; Tan-Yin Yuen; Hsing-Mei Hsieh; Marie Lin; Cheng-Hwai Tzeng; N-E Huang; Adrian Linacre; J C-I Lee
Journal:  Int J Legal Med       Date:  2002-06       Impact factor: 2.686

4.  A simple and sensitive method for quantifying human genomic DNA in forensic specimen extracts.

Authors:  J S Waye; L A Presley; B Budowle; G G Shutler; R M Fourney
Journal:  Biotechniques       Date:  1989-09       Impact factor: 1.993

5.  Increased forensic efficiency of a STR-based Y-specific haplotype by addition of the highly polymorphic DYS385 locus.

Authors:  A Caglià; M Dobosz; I Boschi; E d'Aloja; V L Pascali
Journal:  Int J Legal Med       Date:  1998       Impact factor: 2.686

Review 6.  The Y chromosome in forensic analysis and paternity testing.

Authors:  M A Jobling; A Pandya; C Tyler-Smith
Journal:  Int J Legal Med       Date:  1997       Impact factor: 2.686

7.  Polymerase chain reaction amplification products separated on rehydratable polyacrylamide gels and stained with silver.

Authors:  R C Allen; G Graves; B Budowle
Journal:  Biotechniques       Date:  1989 Jul-Aug       Impact factor: 1.993

8.  High resolution Y chromosome typing: 19 STRs amplified in three multiplex reactions.

Authors:  Elena Bosch; Andrew C Lee; Francesc Calafell; Eduardo Arroyo; Peter Henneman; Peter de Knijff; Mark A Jobling
Journal:  Forensic Sci Int       Date:  2002-01-24       Impact factor: 2.395

Review 9.  Fathers and sons: the Y chromosome and human evolution.

Authors:  M A Jobling; C Tyler-Smith
Journal:  Trends Genet       Date:  1995-11       Impact factor: 11.639

10.  Typing Y chromosome STR haplotypes using redesigned primers.

Authors:  Yiping Hou; Ji Zhang; Dahong Sun; Yinbi Li; Jin Wu; Sizhong Zhang; Mechthild Prinz
Journal:  J Forensic Sci       Date:  2002-01       Impact factor: 1.832

View more
  7 in total

1.  Y-chromosomal STR haplotypes and their applications to forensic and population studies in east Asia.

Authors:  Kyoung Don Kwak; Han Jun Jin; Dong Jik Shin; Jung Min Kim; Lutz Roewer; Michael Krawczak; Chris Tyler-Smith; Wook Kim
Journal:  Int J Legal Med       Date:  2005-04-27       Impact factor: 2.686

2.  Y-chromosomal STR haplotypes in a Northeast Italian population sample using 17plex loci PCR assay.

Authors:  Stefania Turrina; Renzo Atzei; Domenico De Leo
Journal:  Int J Legal Med       Date:  2005-11-19       Impact factor: 2.686

3.  Y-chromosomal STR haplotypes in Chinese Uigur ethnic group.

Authors:  Bo Feng Zhu; Zhen Yuan Wang; Chun Hua Yang; Xiao Song Li; Jun Zhu; Guang Yang; Ping Huang; Yao Liu
Journal:  Int J Legal Med       Date:  2005-06-18       Impact factor: 2.686

4.  Development of a Y-STR 12-plex PCR system and haplotype analysis in a Korean population.

Authors:  Sun Wha Park; Choon Hong Hwang; Eun Min Cho; Ji Hwan Park; Byung Ok Choi; Ki Wha Chung
Journal:  J Genet       Date:  2009-12       Impact factor: 1.166

5.  Null allele sequence structure at the DYS448 locus and implications for profile interpretation.

Authors:  Bruce Budowle; Xavier G Aranda; Robert E Lagace; Lori K Hennessy; John V Planz; Manuel Rodriguez; Arthur J Eisenberg
Journal:  Int J Legal Med       Date:  2008-06-26       Impact factor: 2.686

6.  Haplotypes of 20 Y-chromosomal STRs in a population sample from southeast China (Chaoshan area).

Authors:  Mei Sen Shi; Jian Pin Tang; Ru Feng Bai; Xiao Jun Yu; Jun Yao Lv; Bo Hu
Journal:  Int J Legal Med       Date:  2007-07-20       Impact factor: 2.686

7.  An ultra-high discrimination Y chromosome short tandem repeat multiplex DNA typing system.

Authors:  Erin K Hanson; Jack Ballantyne
Journal:  PLoS One       Date:  2007-08-01       Impact factor: 3.240

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.