Literature DB >> 12897855

Micromechanics of chromatin and chromosomes.

John F Marko1, Michael G Poirier.   

Abstract

The enzymes that transcribe, recombine, package, and duplicate the eukaryotic genome all are highly processive and capable of generating large forces. Understanding chromosome function therefore will require analysis of mechanics as well as biochemistry. Here we review development of new biophysical-biochemical techniques for studying the mechanical properties of isolated chromatin fibers and chromosomes. We also discuss microscopy-based experiments on cells that visualize chromosome structure and dynamics. Experiments on chromatin tell us about its flexibility and fluctuation, as well as quantifying the forces generated during chromatin assembly. Experiments on whole chromosomes provide insight into the higher-order organization of chromatin; for example, recent experiments have shown that the mitotic chromosome is held together by isolated chromatin-chromatin links and not a large, mechanically contiguous non-DNA "scaffold".

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Year:  2003        PMID: 12897855     DOI: 10.1139/o03-047

Source DB:  PubMed          Journal:  Biochem Cell Biol        ISSN: 0829-8211            Impact factor:   3.626


  18 in total

Review 1.  Chromatin physics: Replacing multiple, representation-centered descriptions at discrete scales by a continuous, function-dependent self-scaled model.

Authors:  C Lavelle; A Benecke
Journal:  Eur Phys J E Soft Matter       Date:  2006-02-22       Impact factor: 1.890

2.  Highly compact folding of chromatin induced by cellular cation concentrations. Evidence from atomic force microscopy studies in aqueous solution.

Authors:  Silvia Caño; Juan Manuel Caravaca; Marc Martín; Joan-Ramon Daban
Journal:  Eur Biophys J       Date:  2006-03-30       Impact factor: 1.733

3.  Pulling the chromatin.

Authors:  C Claudet; J Bednar
Journal:  Eur Phys J E Soft Matter       Date:  2006-03-14       Impact factor: 1.890

Review 4.  Nuclear shape, mechanics, and mechanotransduction.

Authors:  Kris Noel Dahl; Alexandre J S Ribeiro; Jan Lammerding
Journal:  Circ Res       Date:  2008-06-06       Impact factor: 17.367

5.  Structure and mechanical characterization of DNA i-motif nanowires by molecular dynamics simulation.

Authors:  Raghvendra Pratap Singh; Ralf Blossey; Fabrizio Cleri
Journal:  Biophys J       Date:  2013-12-17       Impact factor: 4.033

Review 6.  Intracellular manipulation of chromatin using magnetic nanoparticles.

Authors:  Johannes S Kanger; Vinod Subramaniam; Roel van Driel
Journal:  Chromosome Res       Date:  2008       Impact factor: 5.239

Review 7.  Micromechanical studies of mitotic chromosomes.

Authors:  John F Marko
Journal:  Chromosome Res       Date:  2008       Impact factor: 5.239

8.  Do femtonewton forces affect genetic function? A review.

Authors:  Seth Blumberg; Matthew W Pennington; Jens-Christian Meiners
Journal:  J Biol Phys       Date:  2006-03-29       Impact factor: 1.365

9.  Mechanotransduction Mechanisms for Intraventricular Diastolic Vortex Forces and Myocardial Deformations: Part 2.

Authors:  Ares Pasipoularides
Journal:  J Cardiovasc Transl Res       Date:  2015-05-14       Impact factor: 4.132

10.  Mitotic tethers connect sister chromosomes and transmit "cross-polar" force during anaphase A of mitosis in PtK2 cells.

Authors:  Matthew Ono; Daryl Preece; Michelle L Duquette; Arthur Forer; Michael W Berns
Journal:  Biomed Opt Express       Date:  2017-09-05       Impact factor: 3.732

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