Literature DB >> 12897146

Xeroderma pigmentosum group A protein loads as a separate factor onto DNA lesions.

Suzanne Rademakers1, Marcel Volker, Deborah Hoogstraten, Alex L Nigg, Martijn J Moné, Albert A Van Zeeland, Jan H J Hoeijmakers, Adriaan B Houtsmuller, Wim Vermeulen.   

Abstract

Nucleotide excision repair (NER) is the main DNA repair pathway in mammals for removal of UV-induced lesions. NER involves the concerted action of more than 25 polypeptides in a coordinated fashion. The xeroderma pigmentosum group A protein (XPA) has been suggested to function as a central organizer and damage verifier in NER. How XPA reaches DNA lesions and how the protein is distributed in time and space in living cells are unknown. Here we studied XPA in vivo by using a cell line stably expressing physiological levels of functional XPA fused to green fluorescent protein and by applying quantitative fluorescence microscopy. The majority of XPA moves rapidly through the nucleoplasm with a diffusion rate different from those of other NER factors tested, arguing against a preassembled XPA-containing NER complex. DNA damage induced a transient ( approximately 5-min) immobilization of maximally 30% of XPA. Immobilization depends on XPC, indicating that XPA is not the initial lesion recognition protein in vivo. Moreover, loading of replication protein A on NER lesions was not dependent on XPA. Thus, XPA participates in NER by incorporation of free diffusing molecules in XPC-dependent NER-DNA complexes. This study supports a model for a rapid consecutive assembly of free NER factors, and a relatively slow simultaneous disassembly, after repair.

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Year:  2003        PMID: 12897146      PMCID: PMC166334          DOI: 10.1128/MCB.23.16.5755-5767.2003

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  61 in total

1.  The structure-specific endonuclease Ercc1-Xpf is required for targeted gene replacement in embryonic stem cells.

Authors:  L J Niedernhofer; J Essers; G Weeda; B Beverloo; J de Wit; M Muijtjens; H Odijk; J H Hoeijmakers; R Kanaar
Journal:  EMBO J       Date:  2001-11-15       Impact factor: 11.598

2.  Rapid switching of TFIIH between RNA polymerase I and II transcription and DNA repair in vivo.

Authors:  Deborah Hoogstraten; Alex L Nigg; Helen Heath; Leon H F Mullenders; Roel van Driel; Jan H J Hoeijmakers; Wim Vermeulen; Adriaan B Houtsmuller
Journal:  Mol Cell       Date:  2002-11       Impact factor: 17.970

3.  Nuclear dynamics of RAD52 group homologous recombination proteins in response to DNA damage.

Authors:  Jeroen Essers; Adriaan B Houtsmuller; Lieneke van Veelen; Coen Paulusma; Alex L Nigg; Albert Pastink; Wim Vermeulen; Jan H J Hoeijmakers; Roland Kanaar
Journal:  EMBO J       Date:  2002-04-15       Impact factor: 11.598

Review 4.  Protein complexes in nucleotide excision repair.

Authors:  S J Araújo; R D Wood
Journal:  Mutat Res       Date:  1999-09-13       Impact factor: 2.433

5.  Xeroderma pigmentosum complementation group A protein (XPA) modulates RPA-DNA interactions via enhanced complex stability and inhibition of strand separation activity.

Authors:  Steve M Patrick; John J Turchi
Journal:  J Biol Chem       Date:  2002-02-21       Impact factor: 5.157

6.  Xeroderma pigmentosum group A correcting protein from calf thymus.

Authors:  A P Eker; W Vermeulen; N Miura; K Tanaka; N G Jaspers; J H Hoeijmakers; D Bootsma
Journal:  Mutat Res       Date:  1992-09       Impact factor: 2.433

7.  Molecular anatomy of the human excision nuclease assembled at sites of DNA damage.

Authors:  Joyce T Reardon; Aziz Sancar
Journal:  Mol Cell Biol       Date:  2002-08       Impact factor: 4.272

8.  Xeroderma pigmentosum group E cells lack a nuclear factor that binds to damaged DNA.

Authors:  G Chu; E Chang
Journal:  Science       Date:  1988-10-28       Impact factor: 47.728

9.  Identification and characterization of xpac protein, the gene product of the human XPAC (xeroderma pigmentosum group A complementing) gene.

Authors:  N Miura; I Miyamoto; H Asahina; I Satokata; K Tanaka; Y Okada
Journal:  J Biol Chem       Date:  1991-10-15       Impact factor: 5.157

10.  Complementation of DNA repair in xeroderma pigmentosum group A cell extracts by a protein with affinity for damaged DNA.

Authors:  P Robins; C J Jones; M Biggerstaff; T Lindahl; R D Wood
Journal:  EMBO J       Date:  1991-12       Impact factor: 11.598

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  57 in total

1.  Real-time quantification of Xeroderma pigmentosum mRNA from the mammalian cochlea.

Authors:  O'neil W Guthrie; Franklin A Carrero-Martínez
Journal:  Ear Hear       Date:  2010-10       Impact factor: 3.570

2.  Nucleotide excision repair by mutant xeroderma pigmentosum group A (XPA) proteins with deficiency in interaction with RPA.

Authors:  Masafumi Saijo; Arato Takedachi; Kiyoji Tanaka
Journal:  J Biol Chem       Date:  2010-12-09       Impact factor: 5.157

3.  Nuclear proteins: finding and binding target sites in chromatin.

Authors:  Martin E van Royen; Angelika Zotter; Shehu M Ibrahim; Bart Geverts; Adriaan B Houtsmuller
Journal:  Chromosome Res       Date:  2011-01       Impact factor: 5.239

Review 4.  DNA damage response.

Authors:  Giuseppina Giglia-Mari; Angelika Zotter; Wim Vermeulen
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-01-01       Impact factor: 10.005

5.  Definition of a short region of XPG necessary for TFIIH interaction and stable recruitment to sites of UV damage.

Authors:  Fabrizio Thorel; Angelos Constantinou; Isabelle Dunand-Sauthier; Thierry Nouspikel; Philippe Lalle; Anja Raams; Nicolaas G J Jaspers; Wim Vermeulen; Mahmud K K Shivji; Richard D Wood; Stuart G Clarkson
Journal:  Mol Cell Biol       Date:  2004-12       Impact factor: 4.272

6.  In vivo dynamics of chromatin-associated complex formation in mammalian nucleotide excision repair.

Authors:  Martijn J Moné; Tytus Bernas; Christoffel Dinant; Feliks A Goedvree; Erik M M Manders; Marcel Volker; Adriaan B Houtsmuller; Jan H J Hoeijmakers; Wim Vermeulen; Roel van Driel
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-01       Impact factor: 11.205

7.  Specific and efficient binding of xeroderma pigmentosum complementation group A to double-strand/single-strand DNA junctions with 3'- and/or 5'-ssDNA branches.

Authors:  Zhengguan Yang; Marina Roginskaya; Laureen C Colis; Ashis K Basu; Steven M Shell; Yiyong Liu; Phillip R Musich; Constance M Harris; Thomas M Harris; Yue Zou
Journal:  Biochemistry       Date:  2006-12-19       Impact factor: 3.162

8.  Recruitment of the nucleotide excision repair endonuclease XPG to sites of UV-induced dna damage depends on functional TFIIH.

Authors:  Angelika Zotter; Martijn S Luijsterburg; Daniël O Warmerdam; Shehu Ibrahim; Alex Nigg; Wiggert A van Cappellen; Jan H J Hoeijmakers; Roel van Driel; Wim Vermeulen; Adriaan B Houtsmuller
Journal:  Mol Cell Biol       Date:  2006-09-25       Impact factor: 4.272

9.  CSB-Dependent Cyclin-Dependent Kinase 9 Degradation and RNA Polymerase II Phosphorylation during Transcription-Coupled Repair.

Authors:  Lise-Marie Donnio; Anna Lagarou; Gabrielle Sueur; Pierre-Olivier Mari; Giuseppina Giglia-Mari
Journal:  Mol Cell Biol       Date:  2019-03-01       Impact factor: 4.272

Review 10.  Nucleotide Excision Repair: Finely Tuned Molecular Orchestra of Early Pre-incision Events.

Authors:  Qianzheng Zhu; Altaf A Wani
Journal:  Photochem Photobiol       Date:  2016-11-17       Impact factor: 3.421

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