Literature DB >> 12876330

Glucoamylase-like domains in the alpha- and beta-subunits of phosphorylase kinase.

Mark J Pallen1.   

Abstract

Phosphorylase kinase is a four-subunit enzyme involved in the regulation of glycogen breakdown. The traditional textbook view is that only the gamma subunit has enzymatic activity, whereas the other three subunits have a regulatory role. Evidence from homology searches and sequence alignments, however, shows that the alpha- and beta-subunits possess amino-terminal glucoamylase-like domains and suggests that they might possess a previously overlooked amylase activity. If true, this would have important implications for the understanding, diagnosis, and management of glycogen storage diseases. There is thus a clear need to test this hypothesis through enzymatic assays and structural studies.

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Year:  2003        PMID: 12876330      PMCID: PMC2323967          DOI: 10.1110/ps.0371103

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  16 in total

Review 1.  Glucoamylase: structure/function relationships, and protein engineering.

Authors:  J Sauer; B W Sigurskjold; U Christensen; T P Frandsen; E Mirgorodskaya; M Harrison; P Roepstorff; B Svensson
Journal:  Biochim Biophys Acta       Date:  2000-12-29

Review 2.  Structural mimicry in bacterial virulence.

Authors:  C E Stebbins; J E Galán
Journal:  Nature       Date:  2001-08-16       Impact factor: 49.962

3.  The regulatory alpha subunit of phosphorylase kinase may directly participate in the binding of glycogen phosphorylase.

Authors:  I E Andreeva; N A Rice; G M Carlson
Journal:  Biochemistry (Mosc)       Date:  2002-10       Impact factor: 2.487

4.  Identification of a type III secretion system in uropathogenic Escherichia coli.

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Journal:  FEMS Microbiol Lett       Date:  2002-07-02       Impact factor: 2.742

Review 5.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

6.  The calmodulin-binding domain of the catalytic gamma subunit of phosphorylase kinase interacts with its inhibitory alpha subunit: evidence for a Ca2+ sensitive network of quaternary interactions.

Authors:  Nancy A Rice; Owen W Nadeau; Qing Yang; Gerald M Carlson
Journal:  J Biol Chem       Date:  2002-02-14       Impact factor: 5.157

7.  Autosomal glycogenosis of liver and muscle due to phosphorylase kinase deficiency is caused by mutations in the phosphorylase kinase beta subunit (PHKB).

Authors:  B Burwinkel; A J Maichele; O Aagenaes; H D Bakker; A Lerner; Y S Shin; J A Strachan; M W Kilimann
Journal:  Hum Mol Genet       Date:  1997-07       Impact factor: 6.150

8.  Glucoamylase structural, functional, and evolutionary relationships.

Authors:  P M Coutinho; P J Reilly
Journal:  Proteins       Date:  1997-11

9.  Studies on interaction of phosphorylase kinase from rabbit skeletal muscle with glycogen in the presence of ATP and ADP.

Authors:  I E Andreeva; V F Makeeva; N B Livanova; S P Petukhov; B I Kurganov
Journal:  Biochim Biophys Acta       Date:  2001-10-18

Review 10.  Phosphorylase kinase: the complexity of its regulation is reflected in the complexity of its structure.

Authors:  R J Brushia; D A Walsh
Journal:  Front Biosci       Date:  1999-09-15
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  10 in total

1.  The structure of the large regulatory α subunit of phosphorylase kinase examined by modeling and hydrogen-deuterium exchange.

Authors:  Mary Ashley Rimmer; Owen W Nadeau; Jianyi Yang; Antonio Artigues; Yang Zhang; Gerald M Carlson
Journal:  Protein Sci       Date:  2017-11-21       Impact factor: 6.725

2.  Structural characterization of the catalytic γ and regulatory β subunits of phosphorylase kinase in the context of the hexadecameric enzyme complex.

Authors:  Mary Ashley Rimmer; Owen W Nadeau; Antonio Artigues; Gerald M Carlson
Journal:  Protein Sci       Date:  2017-11-21       Impact factor: 6.725

3.  The glucoamylase inhibitor acarbose is a direct activator of phosphorylase kinase.

Authors:  Owen W Nadeau; Weiya Liu; Igor G Boulatnikov; Jessica M Sage; Jennifer L Peters; Gerald M Carlson
Journal:  Biochemistry       Date:  2010-08-10       Impact factor: 3.162

4.  Evidence for the location of the allosteric activation switch in the multisubunit phosphorylase kinase complex from mass spectrometric identification of chemically crosslinked peptides.

Authors:  Owen W Nadeau; David W Anderson; Qing Yang; Antonio Artigues; Justin E Paschall; Gerald J Wyckoff; Jennifer L McClintock; Gerald M Carlson
Journal:  J Mol Biol       Date:  2006-10-21       Impact factor: 5.469

5.  Structure and location of the regulatory β subunits in the (αβγδ)4 phosphorylase kinase complex.

Authors:  Owen W Nadeau; Laura A Lane; Dong Xu; Jessica Sage; Timothy S Priddy; Antonio Artigues; Maria T Villar; Qing Yang; Carol V Robinson; Yang Zhang; Gerald M Carlson
Journal:  J Biol Chem       Date:  2012-09-11       Impact factor: 5.157

6.  Identification of enterohemorrhagic Escherichia coli O26:H- genes required for intestinal colonization in calves.

Authors:  Pauline M van Diemen; Francis Dziva; Mark P Stevens; Timothy S Wallis
Journal:  Infect Immun       Date:  2005-03       Impact factor: 3.441

7.  A multiomics comparison between endometrial cancer and serous ovarian cancer.

Authors:  Hui Zhong; Huiyu Chen; Huahong Qiu; Chen Huang; Zhihui Wu
Journal:  PeerJ       Date:  2020-01-09       Impact factor: 2.984

8.  Complete genome sequence and comparative metabolic profiling of the prototypical enteroaggregative Escherichia coli strain 042.

Authors:  Roy R Chaudhuri; Mohammed Sebaihia; Jon L Hobman; Mark A Webber; Denisse L Leyton; Martin D Goldberg; Adam F Cunningham; Anthony Scott-Tucker; Paul R Ferguson; Christopher M Thomas; Gad Frankel; Christoph M Tang; Edward G Dudley; Ian S Roberts; David A Rasko; Mark J Pallen; Julian Parkhill; James P Nataro; Nicholas R Thomson; Ian R Henderson
Journal:  PLoS One       Date:  2010-01-20       Impact factor: 3.240

9.  The structure of phosphorylase kinase holoenzyme at 9.9 angstroms resolution and location of the catalytic subunit and the substrate glycogen phosphorylase.

Authors:  Catherine Vénien-Bryan; Slavica Jonic; Vasiliki Skamnaki; Nick Brown; Nicolas Bischler; Nikos G Oikonomakos; Nicolas Boisset; Louise N Johnson
Journal:  Structure       Date:  2009-01-14       Impact factor: 5.006

Review 10.  Escherichia coli type III secretion system 2: a new kind of T3SS?

Authors:  Mingxu Zhou; Zhiyan Guo; Qiangde Duan; Philip R Hardwidge; Guoqiang Zhu
Journal:  Vet Res       Date:  2014-03-19       Impact factor: 3.683

  10 in total

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