Literature DB >> 12876322

Determination of membrane protein stability via thermodynamic coupling of folding to thiol-disulfide interchange.

Lidia Cristian1, James D Lear, William F DeGrado.   

Abstract

Although progress has been made in understanding the thermodynamic stability of water-soluble proteins, our understanding of the folding of membrane proteins is at a relatively primitive level. A major obstacle to understanding the folding of membrane proteins is the discovery of systems in which the folding is in thermodynamic equilibrium, and the development of methods to quantitatively assess this equilibrium in micelles and bilayers. Here, we describe the application of disulfide cross-linking to quantitatively measure the thermodynamics of membrane protein association in detergent micelles. The method involves initiating disulfide cross-linking of a protein under reversible redox conditions in a thiol-disulfide buffer and quantitative assessment of the extent of cross-linking at equilibrium. The 19-46 alpha-helical transmembrane segment of the M2 protein from the influenza A virus was used as a model membrane protein system for this study. Previously it has been shown that transmembrane peptides from this protein specifically self-assemble into tetramers that retain the ability to bind to the drug amantadine. We used thiol-disulfide exchange to quantitatively measure the tetramerization equilibrium of this transmembrane protein in dodecylphosphocholine (DPC) detergent micelles. The association constants obtained agree remarkably well with those derived from analytical ultracentrifugation studies. The experimental method established herein should provide a broadly applicable tool for thermodynamic studies of folding, oligomerization and protein-protein interactions of membrane proteins.

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Year:  2003        PMID: 12876322      PMCID: PMC2323959          DOI: 10.1110/ps.0378603

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  55 in total

1.  Detergents modulate dimerization, but not helicity, of the glycophorin A transmembrane domain.

Authors:  L E Fisher; D M Engelman; J N Sturgis
Journal:  J Mol Biol       Date:  1999-10-29       Impact factor: 5.469

2.  Transmembrane domain of M2 protein from influenza A virus studied by solid-state (15)N polarization inversion spin exchange at magic angle NMR.

Authors:  Z Song; F A Kovacs; J Wang; J K Denny; S C Shekar; J R Quine; T A Cross
Journal:  Biophys J       Date:  2000-08       Impact factor: 4.033

3.  Evaluation of the energetic contribution of interhelical Coulombic interactions for coiled coil helix orientation specificity.

Authors:  D L McClain; J P Binfet; M G Oakley
Journal:  J Mol Biol       Date:  2001-10-19       Impact factor: 5.469

4.  Design and characterization of a heterodimeric coiled coil that forms exclusively with an antiparallel relative helix orientation.

Authors:  D L McClain; H L Woods; M G Oakley
Journal:  J Am Chem Soc       Date:  2001-04-04       Impact factor: 15.419

5.  Structure of the transmembrane region of the M2 protein H(+) channel.

Authors:  J Wang; S Kim; F Kovacs; T A Cross
Journal:  Protein Sci       Date:  2001-11       Impact factor: 6.725

6.  The M2 protein of influenza A virus is acylated.

Authors:  M Veit; H D Klenk; A Kendal; R Rott
Journal:  J Gen Virol       Date:  1991-06       Impact factor: 3.891

7.  Exploring models of the influenza A M2 channel: MD simulations in a phospholipid bilayer.

Authors:  L R Forrest; A Kukol; I T Arkin; D P Tieleman; M S Sansom
Journal:  Biophys J       Date:  2000-01       Impact factor: 4.033

8.  Influenza virus M2 integral membrane protein is a homotetramer stabilized by formation of disulfide bonds.

Authors:  L J Holsinger; R A Lamb
Journal:  Virology       Date:  1991-07       Impact factor: 3.616

9.  Regeneration of ribonuclease A from the reduced protein. Isolation and identification of intermediates, and equilibrium treatment.

Authors:  Y Konishi; T Ooi; H A Scheraga
Journal:  Biochemistry       Date:  1981-07-07       Impact factor: 3.162

10.  Reconstitution of the influenza virus M2 ion channel in lipid bilayers.

Authors:  M T Tosteson; L H Pinto; L J Holsinger; R A Lamb
Journal:  J Membr Biol       Date:  1994-10       Impact factor: 1.843

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  23 in total

1.  Method to measure strong protein-protein interactions in lipid bilayers using a steric trap.

Authors:  Heedeok Hong; Tracy M Blois; Zheng Cao; James U Bowie
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-01       Impact factor: 11.205

2.  The conformation of the pore region of the M2 proton channel depends on lipid bilayer environment.

Authors:  Krisna C Duong-Ly; Vikas Nanda; William F Degrado; Kathleen P Howard
Journal:  Protein Sci       Date:  2005-03-01       Impact factor: 6.725

3.  Glycoprotein Ibalpha forms disulfide bonds with 2 glycoprotein Ibbeta subunits in the resting platelet.

Authors:  Shi-Zhong Luo; Xi Mo; Vahid Afshar-Kharghan; Sankaranarayanan Srinivasan; José A López; Renhao Li
Journal:  Blood       Date:  2006-09-28       Impact factor: 22.113

4.  Changes in apparent free energy of helix-helix dimerization in a biological membrane due to point mutations.

Authors:  Mylinh T Duong; Todd M Jaszewski; Karen G Fleming; Kevin R MacKenzie
Journal:  J Mol Biol       Date:  2007-05-18       Impact factor: 5.469

5.  Specific heteromeric association of four transmembrane peptides derived from platelet glycoprotein Ib-IX complex.

Authors:  Shi-Zhong Luo; Renhao Li
Journal:  J Mol Biol       Date:  2008-07-22       Impact factor: 5.469

6.  Stable interactions between the transmembrane domains of the adenosine A2A receptor.

Authors:  Damien Thévenin; Tzvetana Lazarova
Journal:  Protein Sci       Date:  2008-04-23       Impact factor: 6.725

7.  Computational design and experimental characterization of peptides intended for pH-dependent membrane insertion and pore formation.

Authors:  Yao Zhang; René Bartz; Gevorg Grigoryan; Michael Bryant; Jeff Aaronson; Stephen Beck; Nathalie Innocent; Lee Klein; William Procopio; Tom Tucker; Vasant Jadhav; David M Tellers; William F DeGrado
Journal:  ACS Chem Biol       Date:  2015-01-28       Impact factor: 5.100

8.  Use of thiol-disulfide equilibria to measure the energetics of assembly of transmembrane helices in phospholipid bilayers.

Authors:  Lidia Cristian; James D Lear; William F DeGrado
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-01       Impact factor: 11.205

9.  Analysis and prediction of the metabolic stability of proteins based on their sequential features, subcellular locations and interaction networks.

Authors:  Tao Huang; Xiao-He Shi; Ping Wang; Zhisong He; Kai-Yan Feng; Lele Hu; Xiangyin Kong; Yi-Xue Li; Yu-Dong Cai; Kuo-Chen Chou
Journal:  PLoS One       Date:  2010-06-04       Impact factor: 3.240

10.  Screening for transmembrane association in divisome proteins using TOXGREEN, a high-throughput variant of the TOXCAT assay.

Authors:  Claire R Armstrong; Alessandro Senes
Journal:  Biochim Biophys Acta       Date:  2016-07-22
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