Literature DB >> 12871696

A novel developmental mechanism in Dictyostelium revealed in a screen for communication mutants.

Kirsten Kibler1, Tu-Lan Nguyen, Jessica Svetz, Nancy Van Driessche, Miroslava Ibarra, Christopher Thompson, Chad Shaw, Gad Shaulsky.   

Abstract

We performed a screen for signaling genes by selecting mutant strains of Dictyostelium that fail to develop spores in a pure population but sporulate well in chimerae with wild type cells. We found 9 strains whose sporulation was induced up to 10 million-fold in chimerae. Most strains were also able to sporulate in chimerae with each other, but 2 pairs failed to do so, suggesting that the genes in each pair participate in the production of 1 signal. One of the pairs, comD and comB, is described in detail. Sequence analysis revealed that both genes encode putative membrane proteins. ComD is predicted to have 15 transmembrane domains, and ComB has a region of high similarity to the Rab family of small GTPases and 1 transmembrane domain. Similarities between the developmental regulation and cell-type specificity of the genes' expression, the terminal developmental morphology, and the expression pattern of cell-type specific markers in the mutants suggest that comD and comB participate in 1 signal production pathway. This idea is also supported by a high similarity between the global transcriptional profiles of the mutant strains. Differences between the mutant phenotypes late in development suggest that comD and comB participate in separate processes as well. comD has a cell-autonomous role in the specialization of a novel prespore cell type, whereas comB has a cell-autonomous role in prestalk A cell differentiation.

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Year:  2003        PMID: 12871696     DOI: 10.1016/s0012-1606(03)00204-5

Source DB:  PubMed          Journal:  Dev Biol        ISSN: 0012-1606            Impact factor:   3.582


  10 in total

1.  An orderly retreat: Dedifferentiation is a regulated process.

Authors:  Mariko Katoh; Chad Shaw; Qikai Xu; Nancy Van Driessche; Takahiro Morio; Hidekazu Kuwayama; Shinji Obara; Hideko Urushihara; Yoshimasa Tanaka; Gad Shaulsky
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-21       Impact factor: 11.205

2.  Transcriptional profiling of Dictyostelium with RNA sequencing.

Authors:  Edward Roshan Miranda; Gregor Rot; Marko Toplak; Balaji Santhanam; Tomaz Curk; Gad Shaulsky; Blaz Zupan
Journal:  Methods Mol Biol       Date:  2013

3.  New components of the Dictyostelium PKA pathway revealed by Bayesian analysis of expression data.

Authors:  Anup Parikh; Eryong Huang; Christopher Dinh; Blaz Zupan; Adam Kuspa; Devika Subramanian; Gad Shaulsky
Journal:  BMC Bioinformatics       Date:  2010-03-31       Impact factor: 3.169

4.  Cheating by exploitation of developmental prestalk patterning in Dictyostelium discoideum.

Authors:  Anupama Khare; Gad Shaulsky
Journal:  PLoS Genet       Date:  2010-02-26       Impact factor: 5.917

5.  Two novel Src homology 2 domain proteins interact to regulate dictyostelium gene expression during growth and early development.

Authors:  Christopher Sugden; Susan Ross; Gareth Bloomfield; Alasdair Ivens; Jason Skelton; Annette Mueller-Taubenberger; Jeffrey G Williams
Journal:  J Biol Chem       Date:  2010-05-10       Impact factor: 5.157

6.  Transcriptional transitions during Dictyostelium spore germination.

Authors:  Qikai Xu; Miroslava Ibarra; Dana Mahadeo; Chad Shaw; Eryong Huang; Adam Kuspa; David Cotter; Gad Shaulsky
Journal:  Eukaryot Cell       Date:  2004-10

7.  An individual-level selection model for the apparent altruism exhibited by cellular slime moulds.

Authors:  Amotz Zahavi; Keith D Harris; Vidyanand Nanjundiah
Journal:  J Biosci       Date:  2018-03       Impact factor: 1.826

8.  Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology.

Authors:  Nicole Gruenheit; Amy Baldwin; Balint Stewart; Sarah Jaques; Thomas Keller; Katie Parkinson; William Salvidge; Robert Baines; Chris Brimson; Jason B Wolf; Rex Chisholm; Adrian J Harwood; Christopher R L Thompson
Journal:  BMC Biol       Date:  2021-08-24       Impact factor: 7.431

9.  Leaps and lulls in the developmental transcriptome of Dictyostelium discoideum.

Authors:  Rafael David Rosengarten; Balaji Santhanam; Danny Fuller; Mariko Katoh-Kurasawa; William F Loomis; Blaz Zupan; Gad Shaulsky
Journal:  BMC Genomics       Date:  2015-04-13       Impact factor: 3.969

10.  Cell type specificity of a diffusible inducer is determined by a GATA family transcription factor.

Authors:  Thomas Keller; Christopher R L Thompson
Journal:  Development       Date:  2008-03-26       Impact factor: 6.868

  10 in total

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