Literature DB >> 12868892

A cyclopentane conformational restraint for a peptide nucleic acid: design, asymmetric synthesis, and improved binding affinity to DNA and RNA.

Michael C Myers1, Mark A Witschi, Nataliya V Larionova, John M Franck, Russell D Haynes, Toshiaki Hara, Andrzej Grajkowski, Daniel H Appella.   

Abstract

[structure: see text] A strategy to restrict the highly flexible backbone conformation of a peptide nucleic acid (PNA) by incorporation of a cyclopentane ring is proposed. An asymmetric synthesis of cyclopentane-modified PNA is reported, and its binding properties were determined. The cyclopentane ring leads to a significant improvement in the binding properties of the resulting PNA to DNA and RNA.

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Year:  2003        PMID: 12868892     DOI: 10.1021/ol0348811

Source DB:  PubMed          Journal:  Org Lett        ISSN: 1523-7052            Impact factor:   6.005


  5 in total

Review 1.  Insights on chiral, backbone modified peptide nucleic acids: Properties and biological activity.

Authors:  Maria Moccia; Mauro F A Adamo; Michele Saviano
Journal:  Artif DNA PNA XNA       Date:  2016-01-11

Review 2.  Perspectives on conformationally constrained peptide nucleic acid (PNA): insights into the structural design, properties and applications.

Authors:  Chaturong Suparpprom; Tirayut Vilaivan
Journal:  RSC Chem Biol       Date:  2022-03-18

3.  Cyclopentane peptide nucleic acid: Gold nanoparticle conjugates for the detection of nucleic acids in a microfluidic format.

Authors:  Harsha Amarasekara; Kaylyn M Oshaben; Kendra B Jeans; Paniz Rezvan Sangsari; Nicole Y Morgan; Brian O'Farrell; Daniel H Appella
Journal:  Biopolymers       Date:  2021-11-23       Impact factor: 2.240

4.  Cyclopentane-peptide nucleic acids for qualitative, quantitative, and repetitive detection of nucleic acids.

Authors:  Christopher M Micklitsch; Bereket Yemane Oquare; Chao Zhao; Daniel H Appella
Journal:  Anal Chem       Date:  2012-12-18       Impact factor: 6.986

Review 5.  Chiral peptide nucleic acids with a substituent in the N-(2-aminoethy)glycine backbone.

Authors:  Toru Sugiyama; Atsushi Kittaka
Journal:  Molecules       Date:  2012-12-27       Impact factor: 4.411

  5 in total

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