Literature DB >> 12857953

Peptide synthesis with a template-like RNA guide and aminoacyl phosphate adaptors.

Koji Tamura1, Paul Schimmel.   

Abstract

The genetic code is thought to have developed from an early system of RNA-dependent peptide synthesis. To investigate one kind of template-like peptide synthesis that might emerge from an RNA world, we constructed highly reactive aminoacyl phosphate oligonucleotides as adaptors that bound to RNA guide sequences. The reactive aminoacyl groups mimic a chemistry found in modern protein biosynthesis. Guide sequence interactions with adaptors were borrowed in part from universal contacts seen between tRNAs and rRNA. With these constructions, di- and tripeptides formed in a single guide sequence-dependent reaction. The order of amino acids was not random but directional in a way consistent with substrate reactivities. No ribosomes or ribozymes were required. Thus, aminoacyl phosphate adaptors and RNA guides could, in principle, have been intermediates in the transition from the RNA world to modern template-dependent protein synthesis.

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Year:  2003        PMID: 12857953      PMCID: PMC166369          DOI: 10.1073/pnas.1432909100

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  23 in total

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Journal:  Biochemistry       Date:  2001-06-19       Impact factor: 3.162

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Journal:  Proc Natl Acad Sci U S A       Date:  1988-02       Impact factor: 11.205

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Journal:  Nature       Date:  1974-08-16       Impact factor: 49.962

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Authors:  M Paecht-Horowitz; J Berger; A Katchalsky
Journal:  Nature       Date:  1970-11-14       Impact factor: 49.962

Review 6.  Aminoacyl tRNA synthetases: general scheme of structure-function relationships in the polypeptides and recognition of transfer RNAs.

Authors:  P Schimmel
Journal:  Annu Rev Biochem       Date:  1987       Impact factor: 23.643

7.  A base pair between tRNA and 23S rRNA in the peptidyl transferase centre of the ribosome.

Authors:  R R Samaha; R Green; H F Noller
Journal:  Nature       Date:  1995-09-28       Impact factor: 49.962

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9.  Oligonucleotide-directed peptide synthesis in a ribosome- and ribozyme-free system.

Authors:  K Tamura; P Schimmel
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-13       Impact factor: 11.205

10.  Efficient aminoacylation of resected RNA helices by class II aspartyl-tRNA synthetase dependent on a single nucleotide.

Authors:  M Frugier; C Florentz; R Giegé
Journal:  EMBO J       Date:  1994-05-01       Impact factor: 11.598

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  17 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-01       Impact factor: 11.205

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Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-05       Impact factor: 11.205

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5.  Multiple translational products from a five-nucleotide ribozyme.

Authors:  Rebecca M Turk; Nataliya V Chumachenko; Michael Yarus
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-22       Impact factor: 11.205

6.  A Proposal of the Ur-proteome.

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7.  Principles of chemical geometry underlying chiral selectivity in RNA minihelix aminoacylation.

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8.  Single nucleotide translation without ribosomes.

Authors:  Biswarup Jash; Peter Tremmel; Dejana Jovanovic; Clemens Richert
Journal:  Nat Chem       Date:  2021-07-26       Impact factor: 24.427

Review 9.  The origin and evolution of the ribosome.

Authors:  Temple F Smith; Jung C Lee; Robin R Gutell; Hyman Hartman
Journal:  Biol Direct       Date:  2008-04-22       Impact factor: 4.540

Review 10.  Reviving the RNA World: An Insight into the Appearance of RNA Methyltransferases.

Authors:  Ajay K Rana; Serge Ankri
Journal:  Front Genet       Date:  2016-06-06       Impact factor: 4.599

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