Literature DB >> 12856150

Revamp a model-status and prospects of the Dictyostelium genome project.

Ludwig Eichinger1.   

Abstract

International efforts are underway that aim at determining the complete genome sequence of the social amoeba Dictyostelium discoideum. As strategy, a whole chromosome shotgun (WCS) approach was chosen and each of the six Dictyostelium chromosomes was assigned to project partners. The project is well advanced, chromosome 2 was recently published, and it is expected that the sequences of chromosomes 1 and 6 and a gene catalogue for the complete genome will be available at the end of this year. The genome sequence, together with powerful molecular genetic tools, will undoubtedly further accelerate Dictyostelium research into a number of fundamental biological processes that are common to a wide range of eukaryotes. Furthermore, it will constitute the basis for genome-wide functional analyses. The integration of results from these studies should ultimately lead to a better understanding of the complex networks that govern cellular behavior and development.

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Year:  2003        PMID: 12856150     DOI: 10.1007/s00294-003-0416-1

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  84 in total

1.  A high-resolution HAPPY map of Dictyostelium discoideum chromosome 6.

Authors:  B A Konfortov; H M Cohen; A T Bankier; P H Dear
Journal:  Genome Res       Date:  2000-11       Impact factor: 9.043

2.  A kingdom-level phylogeny of eukaryotes based on combined protein data.

Authors:  S L Baldauf; A J Roger; I Wenk-Siefert; W F Doolittle
Journal:  Science       Date:  2000-11-03       Impact factor: 47.728

3.  Functional organization of the yeast proteome by systematic analysis of protein complexes.

Authors:  Anne-Claude Gavin; Markus Bösche; Roland Krause; Paola Grandi; Martina Marzioch; Andreas Bauer; Jörg Schultz; Jens M Rick; Anne-Marie Michon; Cristina-Maria Cruciat; Marita Remor; Christian Höfert; Malgorzata Schelder; Miro Brajenovic; Heinz Ruffner; Alejandro Merino; Karin Klein; Manuela Hudak; David Dickson; Tatjana Rudi; Volker Gnau; Angela Bauch; Sonja Bastuck; Bettina Huhse; Christina Leutwein; Marie-Anne Heurtier; Richard R Copley; Angela Edelmann; Erich Querfurth; Vladimir Rybin; Gerard Drewes; Manfred Raida; Tewis Bouwmeester; Peer Bork; Bertrand Seraphin; Bernhard Kuster; Gitte Neubauer; Giulio Superti-Furga
Journal:  Nature       Date:  2002-01-10       Impact factor: 49.962

Review 4.  Dictyostelium as model system for studies of the actin cytoskeleton by molecular genetics.

Authors:  L Eichinger; S S Lee; M Schleicher
Journal:  Microsc Res Tech       Date:  1999-10-15       Impact factor: 2.769

5.  A comprehensive two-hybrid analysis to explore the yeast protein interactome.

Authors:  T Ito; T Chiba; R Ozawa; M Yoshida; M Hattori; Y Sakaki
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-13       Impact factor: 11.205

Review 6.  Life with 6000 genes.

Authors:  A Goffeau; B G Barrell; H Bussey; R W Davis; B Dujon; H Feldmann; F Galibert; J D Hoheisel; C Jacq; M Johnston; E J Louis; H W Mewes; Y Murakami; P Philippsen; H Tettelin; S G Oliver
Journal:  Science       Date:  1996-10-25       Impact factor: 47.728

7.  DNA-mediated transformation in Dictyostelium discoideum: regulated expression of an actin gene fusion.

Authors:  W Nellen; C Silan; R A Firtel
Journal:  Mol Cell Biol       Date:  1984-12       Impact factor: 4.272

8.  Inducible expression of calmodulin antisense RNA in Dictyostelium cells inhibits the completion of cytokinesis.

Authors:  T Liu; J G Williams; M Clarke
Journal:  Mol Biol Cell       Date:  1992-12       Impact factor: 4.138

9.  Homologous recombination in the Dictyostelium alpha-actinin gene leads to an altered mRNA and lack of the protein.

Authors:  W Witke; W Nellen; A Noegel
Journal:  EMBO J       Date:  1987-12-20       Impact factor: 11.598

10.  A transcriptional profile of multicellular development in Dictyostelium discoideum.

Authors:  Nancy Van Driessche; Chad Shaw; Mariko Katoh; Takahiro Morio; Richard Sucgang; Miroslava Ibarra; Hidekazu Kuwayama; Tamao Saito; Hideko Urushihara; Mineko Maeda; Ikuo Takeuchi; Hiroshi Ochiai; William Eaton; Jeffrey Tollett; John Halter; Adam Kuspa; Yoshimasa Tanaka; Gad Shaulsky
Journal:  Development       Date:  2002-04       Impact factor: 6.868

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  3 in total

1.  Heteromeric p97/p97R155C complexes induce dominant negative changes in wild-type and autophagy 9-deficient Dictyostelium strains.

Authors:  Khalid Arhzaouy; Karl-Heinz Strucksberg; Sze Man Tung; Karthikeyan Tangavelou; Maria Stumpf; Jan Faix; Rolf Schröder; Christoph S Clemen; Ludwig Eichinger
Journal:  PLoS One       Date:  2012-10-03       Impact factor: 3.240

Review 2.  The professional phagocyte Dictyostelium discoideum as a model host for bacterial pathogens.

Authors:  Salvatore Bozzaro; Ludwig Eichinger
Journal:  Curr Drug Targets       Date:  2011-06       Impact factor: 3.465

3.  STATc is a key regulator of the transcriptional response to hyperosmotic shock.

Authors:  Jianbo Na; Budi Tunggal; Ludwig Eichinger
Journal:  BMC Genomics       Date:  2007-05-21       Impact factor: 3.969

  3 in total

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