Literature DB >> 12846842

Cloning, expression and characterization of a family-74 xyloglucanase from Thermobifida fusca.

Diana C Irwin1, Mark Cheng, Bosong Xiang, Jocelyn K C Rose, David B Wilson.   

Abstract

Thermobifida fusca xyloglucan-specific endo-beta-1,4-glucanase (Xeg)74 and the Xeg74 catalytic domain (CD) were cloned, expressed in Escherichia coli, purified and characterized. This enzyme has a glycohydrolase family-74 CD that is a specific xyloglucanase followed by a family-2 carbohydrate binding module at the C terminus. The Michaelis constant (Km) and maximal rate (Vmax) values for hydrolysis of tamarind seed xyloglucan (tamXG) are 2.4 micro m and 966 micro mol xyloglucan oligosaccharides (XGOs) min-1. micro mol protein-1. More than 75% of the activity was retained after a 16-h incubation at temperatures up to 60 degrees C. The enzyme was most active at pH 6.0-9.4. NMR analysis showed that its catalytic mechanism is inverting. The oligosaccharide products from hydrolysis of tamXG were determined by MS analysis. Cel9B, an active carboxymethylcellulose (CMC)ase from T. fusca, was also found to have activity on xyloglucan (XG) at 49 micro mol.min-1. micro mol protein-1, but it could not hydrolyze XG units containing galactose. An XG/cellulose composite was prepared by growing Gluconacetobacterxylinus on glucose with tamXG in the medium. Although a mixture of purified cellulases was unable to degrade this material, the composite material was fully hydrolyzed when Xeg74 was added. T. fusca was not able to grow on tamXG, but Xeg74 was found in the culture supernatant at the same level as was found in cultures grown on Solka Floc. The function of this enzyme appears to be to break down the XG surrounding cellulose fibrils found in biomass so that T. fusca can utilize the cellulose as a carbon source.

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Year:  2003        PMID: 12846842     DOI: 10.1046/j.1432-1033.2003.03695.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  11 in total

1.  Identification and characterization of a xyloglucan-specific family 74 glycosyl hydrolase from Streptomyces coelicolor A3(2).

Authors:  Bolormaa Enkhbaatar; Uyangaa Temuujin; Ju-Hyeon Lim; Won-Jae Chi; Yong-Keun Chang; Soon-Kwang Hong
Journal:  Appl Environ Microbiol       Date:  2011-11-18       Impact factor: 4.792

2.  Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX.

Authors:  Athanasios Lykidis; Konstantinos Mavromatis; Natalia Ivanova; Iain Anderson; Miriam Land; Genevieve DiBartolo; Michele Martinez; Alla Lapidus; Susan Lucas; Alex Copeland; Paul Richardson; David B Wilson; Nikos Kyrpides
Journal:  J Bacteriol       Date:  2007-01-05       Impact factor: 3.490

3.  High-level expression of a suite of thermostable cell wall-degrading enzymes from the chloroplast genome.

Authors:  Kerstin Petersen; Ralph Bock
Journal:  Plant Mol Biol       Date:  2011-02-06       Impact factor: 4.076

4.  Substrate specificity, regiospecificity, and processivity in glycoside hydrolase family 74.

Authors:  Gregory Arnal; Peter J Stogios; Jathavan Asohan; Mohamed A Attia; Tatiana Skarina; Alexander Holm Viborg; Bernard Henrissat; Alexei Savchenko; Harry Brumer
Journal:  J Biol Chem       Date:  2019-07-19       Impact factor: 5.157

5.  Isolation and characterization of a novel glycosyl hydrolase family 74 (GH74) cellulase from the black goat rumen metagenomic library.

Authors:  Yun-Hee Song; Kyung-Tai Lee; Jin-Young Baek; Min-Ju Kim; Mi-Ra Kwon; Young-Joo Kim; Mi-Rim Park; Haesu Ko; Jin-Sung Lee; Keun-Sung Kim
Journal:  Folia Microbiol (Praha)       Date:  2016-11-19       Impact factor: 2.099

6.  Cloning and characterization of two xyloglucanases from Paenibacillus sp. strain KM21.

Authors:  Katsuro Yaoi; Tomonori Nakai; Yoshiro Kameda; Ayako Hiyoshi; Yasushi Mitsuishi
Journal:  Appl Environ Microbiol       Date:  2005-12       Impact factor: 4.792

7.  Conversion of the free Cellvibrio japonicus xyloglucan degradation system to the cellulosomal mode.

Authors:  Julie Vanderstraeten; Babette Lamote; Maria João Maurício da Fonseca; Philippe De Groote; Yves Briers
Journal:  Appl Microbiol Biotechnol       Date:  2022-07-23       Impact factor: 5.560

8.  Structural evidence for the evolution of xyloglucanase activity from xyloglucan endo-transglycosylases: biological implications for cell wall metabolism.

Authors:  Martin J Baumann; Jens M Eklöf; Gurvan Michel; Asa M Kallas; Tuula T Teeri; Mirjam Czjzek; Harry Brumer
Journal:  Plant Cell       Date:  2007-06-08       Impact factor: 11.277

9.  Crystallization and preliminary X-ray diffraction analysis of a new xyloglucanase from Xanthomonas campestris pv. campestris.

Authors:  Evandro Ares de Araújo; Atílio Tomazini; Marco Antonio Seiki Kadowaki; Mário Tyago Murakami; Igor Polikarpov
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-05-25

10.  Characterization of an endo-processive-type xyloglucanase having a β-1,4-glucan-binding module and an endo-type xyloglucanase from Streptomyces avermitilis.

Authors:  Hitomi Ichinose; Yuko Araki; Mari Michikawa; Koichi Harazono; Katsuro Yaoi; Shuichi Karita; Satoshi Kaneko
Journal:  Appl Environ Microbiol       Date:  2012-08-31       Impact factor: 4.792

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