Literature DB >> 12829392

Substrate specificity of the alpha-L-arabinofuranosidase from Rhizomucor pusillus HHT-1.

A K M Shofiqur Rahman1, Koji Kato, Shingo Kawai, Kazuhiro Takamizawa.   

Abstract

The alpha-L-arabinofuranosidase (AF) from the fungus Rhizomucor pusillus HHT-1 released arabinose at appreciable rates from (1-->5)-alpha-L-arabinofuranooligosaccharides, sugar beet arabinan and debranched arabinan. This enzyme preferentially hydrolyzed the terminal arabinofuranosyl residue [alpha-(1-->5)-linked] of the arabinan backbone rather than the arabinosyl side chain [alpha-(1-->3)-linked residues]. The enzyme-hydrolyzed arabinan reacted at and debranched the arabinan almost at the same rate, and the degree of conversion for both cases was 65%. Methylation analysis of arabinan showed that the arabinosyl-linkage proportions were 2:2:2:1, respectively, for (1-->5)-Araf, T-Araf, (1-->3, 5)-Araf and (1-->3)-Araf, while the ratios for the AF-digested arabinan shifted to 3:1:2:1. Enzyme digestion resulted in an increase in the proportion of (1-->5)-linked arabinose and a decrease in the proportion of terminal arabinose indicated this AF cleaved the terminal arabinosyl residue of the arabinan back bone [alpha-(1-->5)-linked residues]. Peak assignments in the 13C NMR spectra also confirmed this linkage composition of four kinds of arabinose residues. Both 1H and 13C NMR spectra are dominated by signals of the alpha-anomeric configuration of the arabinofuranosyl moieties. No signals were recorded for arabinopyranosyl moieties in the NMR spectra. Methylation and NMR analysis of native and AF-digested arabinan revealed that this alpha-L-arabinofuranosidase can only hydrolyse alpha-L-arabinofuranosyl residues of arabinan.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12829392     DOI: 10.1016/s0008-6215(03)00203-9

Source DB:  PubMed          Journal:  Carbohydr Res        ISSN: 0008-6215            Impact factor:   2.104


  5 in total

Review 1.  Alpha-L-arabinofuranosidases: the potential applications in biotechnology.

Authors:  Mondher Th Numan; Narayan B Bhosle
Journal:  J Ind Microbiol Biotechnol       Date:  2005-12-30       Impact factor: 3.346

2.  Structure of a novel thermostable GH51 α-L-arabinofuranosidase from Thermotoga petrophila RKU-1.

Authors:  Tatiana A C B Souza; Camila R Santos; Angelica R Souza; Daiane P Oldiges; Roberto Ruller; Rolf A Prade; Fabio M Squina; Mario T Murakami
Journal:  Protein Sci       Date:  2011-08-03       Impact factor: 6.725

3.  Two Distinct α-l-Arabinofuranosidases in Caldicellulosiruptor Species Drive Degradation of Arabinose-Based Polysaccharides.

Authors:  Mohammad Abu Saleh; Wen-Jie Han; Ming Lu; Bing Wang; Huayue Li; Robert M Kelly; Fu-Li Li
Journal:  Appl Environ Microbiol       Date:  2017-06-16       Impact factor: 4.792

4.  Biochemical and Molecular Dynamics Study of a Novel GH 43 α-l-Arabinofuranosidase/β-Xylosidase From Caldicellulosiruptor saccharolyticus DSM8903.

Authors:  Md Abu Saleh; Shafi Mahmud; Sarah Albogami; Ahmed M El-Shehawi; Gobindo Kumar Paul; Shirmin Islam; Amit Kumar Dutta; Md Salah Uddin; Shahriar Zaman
Journal:  Front Bioeng Biotechnol       Date:  2022-02-11

5.  Growth of Chitinophaga pinensis on Plant Cell Wall Glycans and Characterisation of a Glycoside Hydrolase Family 27 β-l-Arabinopyranosidase Implicated in Arabinogalactan Utilisation.

Authors:  Lauren S McKee; Harry Brumer
Journal:  PLoS One       Date:  2015-10-08       Impact factor: 3.240

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.