Literature DB >> 12827524

Gene expression profiling of plant responses to abiotic stress.

Samuel P Hazen1, Yajun Wu, Joel A Kreps.   

Abstract

Expression profiling has become an important tool to investigate how an organism responds to environmental changes. Plants, being sessile, have the ability to dramatically alter their gene expression patterns in response to environmental changes such as temperature, water availability or the presence of deleterious levels of ions. Sometimes these transcriptional changes are successful adaptations leading to tolerance while in other instances the plant ultimately fails to adapt to the new environment and is labeled as sensitive to that condition. Expression profiling can define both tolerant and sensitive responses. These profiles of plant response to environmental extremes (abiotic stresses) are expected to lead to regulators that will be useful in biotechnological approaches to improve stress tolerance as well as to new tools for studying regulatory genetic circuitry. Finally, data mining of the alterations in the plant transcriptome will lead to further insights into how abiotic stress affects plant physiology.

Mesh:

Year:  2003        PMID: 12827524     DOI: 10.1007/s10142-003-0088-4

Source DB:  PubMed          Journal:  Funct Integr Genomics        ISSN: 1438-793X            Impact factor:   3.410


  48 in total

1.  TOGA: an automated parsing technology for analyzing expression of nearly all genes.

Authors:  J G Sutcliffe; P E Foye; M G Erlander; B S Hilbush; L J Bodzin; J T Durham; K W Hasel
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-29       Impact factor: 11.205

2.  Orchestrated transcription of key pathways in Arabidopsis by the circadian clock.

Authors:  S L Harmer; J B Hogenesch; M Straume; H S Chang; B Han; T Zhu; X Wang; J A Kreps; S A Kay
Journal:  Science       Date:  2000-12-15       Impact factor: 47.728

3.  Transcriptional profiling reveals novel interactions between wounding, pathogen, abiotic stress, and hormonal responses in Arabidopsis.

Authors:  Yong Hwa Cheong; Hur-Song Chang; Rajeev Gupta; Xun Wang; Tong Zhu; Sheng Luan
Journal:  Plant Physiol       Date:  2002-06       Impact factor: 8.340

Review 4.  Complexity, cross talk and integration of plant MAP kinase signalling.

Authors:  Claudia Jonak; László Okrész; László Bögre; Heribert Hirt
Journal:  Curr Opin Plant Biol       Date:  2002-10       Impact factor: 7.834

5.  Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress-inducible transcription factor.

Authors:  M Kasuga; Q Liu; S Miura; K Yamaguchi-Shinozaki; K Shinozaki
Journal:  Nat Biotechnol       Date:  1999-03       Impact factor: 54.908

6.  Quantitative monitoring of gene expression patterns with a complementary DNA microarray.

Authors:  M Schena; D Shalon; R W Davis; P O Brown
Journal:  Science       Date:  1995-10-20       Impact factor: 47.728

7.  Differential gene expression in response to mechanical wounding and insect feeding in Arabidopsis.

Authors:  P Reymond; H Weber; M Damond; E E Farmer
Journal:  Plant Cell       Date:  2000-05       Impact factor: 11.277

8.  Growth of the maize primary root at low water potentials : I. Spatial distribution of expansive growth.

Authors:  R E Sharp; W K Silk; T C Hsiao
Journal:  Plant Physiol       Date:  1988-05       Impact factor: 8.340

9.  Gene expression analyses of Arabidopsis chromosome 2 using a genomic DNA amplicon microarray.

Authors:  Heenam Kim; Erik C Snesrud; Brian Haas; Foo Cheung; Christopher D Town; John Quackenbush
Journal:  Genome Res       Date:  2003-03       Impact factor: 9.043

10.  Gene expression profiles during the initial phase of salt stress in rice.

Authors:  S Kawasaki; C Borchert; M Deyholos; H Wang; S Brazille; K Kawai; D Galbraith; H J Bohnert
Journal:  Plant Cell       Date:  2001-04       Impact factor: 11.277

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  18 in total

1.  Gene expression profiling of potato responses to cold, heat, and salt stress.

Authors:  Willem Albert Rensink; Stacey Iobst; Amy Hart; Svetlana Stegalkina; Jia Liu; C Robin Buell
Journal:  Funct Integr Genomics       Date:  2005-04-22       Impact factor: 3.410

2.  Transcript expression profiling of stress responsive genes in response to short-term salt or PEG stress in sugarcane leaves.

Authors:  Vikas Yadav Patade; Sujata Bhargava; Penna Suprasanna
Journal:  Mol Biol Rep       Date:  2011-06-26       Impact factor: 2.316

3.  Integrating miRNA and mRNA expression profiles in response to heat stress-induced injury in rat small intestine.

Authors:  Jin Yu; Fenghua Liu; Peng Yin; Xiaoyu Zhu; Guiling Cheng; Nin Wang; An Lu; Weili Luan; Nuowei Zhang; Jiefeng Li; Kaijun Guo; Yulong Yin; Huichuan Wang; Jianqin Xu
Journal:  Funct Integr Genomics       Date:  2010-11-06       Impact factor: 3.410

4.  The association among gene expression responses to nine abiotic stress treatments in Arabidopsis thaliana.

Authors:  William R Swindell
Journal:  Genetics       Date:  2006-10-08       Impact factor: 4.562

5.  Monitoring the expression profiles of genes induced by hyperosmotic, high salinity, and oxidative stress and abscisic acid treatment in Arabidopsis cell culture using a full-length cDNA microarray.

Authors:  Seiji Takahashi; Motoaki Seki; Junko Ishida; Masakazu Satou; Tetsuya Sakurai; Mari Narusaka; Asako Kamiya; Maiko Nakajima; Akiko Enju; Kenji Akiyama; Kazuko Yamaguchi-Shinozaki; Kazuo Shinozaki
Journal:  Plant Mol Biol       Date:  2004-09       Impact factor: 4.076

6.  Identification of a novel gene (Hsdr4) involved in water-stress tolerance in wild barley.

Authors:  Tatiana Suprunova; Tamar Krugman; Assaf Distelfeld; Tzion Fahima; Eviatar Nevo; Abraham Korol
Journal:  Plant Mol Biol       Date:  2007-01-21       Impact factor: 4.076

7.  CarNAC4, a NAC-type chickpea transcription factor conferring enhanced drought and salt stress tolerances in Arabidopsis.

Authors:  Xingwang Yu; Yanmin Liu; Shuang Wang; Yuan Tao; Zhankui Wang; Yingjie Shu; Hui Peng; Abudoukeyumu Mijiti; Ze Wang; Hua Zhang; Hao Ma
Journal:  Plant Cell Rep       Date:  2015-12-09       Impact factor: 4.570

8.  Molecular characterization of stress-inducible GmNAC genes in soybean.

Authors:  Lam-Son Phan Tran; Truyen N Quach; Satish K Guttikonda; Donavan L Aldrich; Rajesh Kumar; Anjanasree Neelakandan; Babu Valliyodan; Henry T Nguyen
Journal:  Mol Genet Genomics       Date:  2009-03-11       Impact factor: 3.291

Review 9.  Arabidopsis to rice. Applying knowledge from a weed to enhance our understanding of a crop species.

Authors:  W A Rensink; C Robin Buell
Journal:  Plant Physiol       Date:  2004-06       Impact factor: 8.340

10.  Diverse transcriptional programs associated with environmental stress and hormones in the Arabidopsis receptor-like kinase gene family.

Authors:  Lee Chae; Sylvia Sudat; Sandrine Dudoit; Tong Zhu; Sheng Luan
Journal:  Mol Plant       Date:  2009-01       Impact factor: 13.164

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