Literature DB >> 12824386

Identification of patterns in biological sequences at the ALGGEN server: PROMO and MALGEN.

Domènec Farré1, Romà Roset, Mario Huerta, José E Adsuara, Llorenç Roselló, M Mar Albà, Xavier Messeguer.   

Abstract

In this paper we present several web-based tools to identify conserved patterns in sequences. In particular we present details on the functionality of PROMO version 2.0, a program for the prediction of transcription factor binding site in a single sequence or in a group of related sequences and, of MALGEN, a tool to visualize sequence correspondences among long DNA sequences. The web tools and associated documentation can be accessed at http://www.lsi.upc.es/~alggen (RESEARCH link).

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Year:  2003        PMID： 12824386      PMCID： PMC169011          DOI： 10.1093/nar/gkg605

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


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