Literature DB >> 12815951

[The informational concept of searching for periodicity in symbol sequences].

E V Korotkov1, M A Korotkova, F E Frenkel', N A Kudriashov.   

Abstract

Method of informational decomposition has been developed, allowing one to reveal hidden periodicity in any symbol sequences. The informational decomposition is calculated without conversion of a symbol sequence into the numerical one, which facilitates finding periodicities in a symbol sequence. The method permits introducing an analog of the autocorrelation function of a symbol sequence. The method developed by us has been applied to reveal hidden periodicities in nucleotide and amino acid sequences, as well as in different poetical texts. Hidden periodicity has been detected in various genes, testifying to their quantum structure. The functional and structural role of hidden periodicity is discussed.

Mesh:

Year:  2003        PMID: 12815951

Source DB:  PubMed          Journal:  Mol Biol (Mosk)        ISSN: 0026-8984


  7 in total

1.  The structure of selective dinucleotide interactions and periodicities in D melanogaster mtDNA.

Authors:  Carlos Y Valenzuela
Journal:  Biol Res       Date:  2014-05-23       Impact factor: 5.612

2.  An approach for searching insertions in bacterial genes leading to the phase shift of triplet periodicity.

Authors:  Maria A Korotkova; Nikolay A Kudryashov; Eugene V Korotkov
Journal:  Genomics Proteomics Bioinformatics       Date:  2011-10       Impact factor: 7.691

3.  Database of Periodic DNA Regions in Major Genomes.

Authors:  Felix E Frenkel; Maria A Korotkova; Eugene V Korotkov
Journal:  Biomed Res Int       Date:  2017-01-15       Impact factor: 3.411

4.  Poetic speech melody: A crucial link between music and language.

Authors:  Winfried Menninghaus; Valentin Wagner; Christine A Knoop; Mathias Scharinger
Journal:  PLoS One       Date:  2018-11-07       Impact factor: 3.240

5.  Hierarchical structure of cascade of primary and secondary periodicities in Fourier power spectrum of alphoid higher order repeats.

Authors:  Vladimir Paar; Nenad Pavin; Ivan Basar; Marija Rosandić; Matko Gluncić; Nils Paar
Journal:  BMC Bioinformatics       Date:  2008-11-03       Impact factor: 3.169

6.  [Chromosomal localization and molecular organization of human genomic fragment containing TNF/LT locus in transgenic mice].

Authors:  A R Galimov; A A Kruglov; N L Bol'sheva; O Iu Iurkevich; D Ia Lipin'sh; I A Mufazalov; D V Kuprash; S A Nedospasov
Journal:  Mol Biol (Mosk)       Date:  2008 Jul-Aug

7.  Using triplet periodicity of nucleotide sequences for finding potential reading frame shifts in genes.

Authors:  F E Frenkel; E V Korotkov
Journal:  DNA Res       Date:  2009-03-03       Impact factor: 4.458

  7 in total

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