Literature DB >> 12805536

Evolution of the protein repertoire.

Cyrus Chothia1, Julian Gough, Christine Vogel, Sarah A Teichmann.   

Abstract

Most proteins have been formed by gene duplication, recombination, and divergence. Proteins of known structure can be matched to about 50% of genome sequences, and these data provide a quantitative description and can suggest hypotheses about the origins of these processes.

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Year:  2003        PMID： 12805536     DOI： 10.1126/science.1085371

Source DB:  PubMed          Journal:  Science        ISSN： 0036-8075            Impact factor:   47.728


  215 in total

1.  The SUPERFAMILY database in 2004: additions and improvements.

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2.  Geometry and symmetry presculpt the free-energy landscape of proteins.

Authors:  Trinh Xuan Hoang; Antonio Trovato; Flavio Seno; Jayanth R Banavar; Amos Maritan
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3.  Simulating evolution by gene duplication of protein features that require multiple amino acid residues.

Authors:  Michael J Behe; David W Snoke
Journal:  Protein Sci       Date:  2004-08-31       Impact factor: 6.725

Review 4.  Proteins: form and function.

Authors:  Roy D Sleator
Journal:  Bioeng Bugs       Date:  2012-03-01

5.  A formal test of the theory of universal common ancestry.

Authors:  Douglas L Theobald
Journal:  Nature       Date:  2010-05-13       Impact factor: 49.962

6.  How significant is a protein structure similarity with TM-score = 0.5?

Authors:  Jinrui Xu; Yang Zhang
Journal:  Bioinformatics       Date:  2010-02-17       Impact factor: 6.937

7.  Age-dependent gain of alternative splice forms and biased duplication explain the relation between splicing and duplication.

Authors:  Julien Roux; Marc Robinson-Rechavi
Journal:  Genome Res       Date:  2010-12-20       Impact factor: 9.043

8.  Prokaryotic phylogenies inferred from protein structural domains.

Authors:  Eric J Deeds; Hooman Hennessey; Eugene I Shakhnovich
Journal:  Genome Res       Date:  2005-03       Impact factor: 9.043

9.  Universal sharing patterns in proteomes and evolution of protein fold architecture and life.

Authors:  Gustavo Caetano-Anollés; Derek Caetano-Anollés
Journal:  J Mol Evol       Date:  2005-04       Impact factor: 2.395

10.  Duplicated zebrafish insulin-like growth factor binding protein-5 genes with split functional domains: evidence for evolutionarily conserved IGF binding, nuclear localization, and transactivation activity.

Authors:  Wei Dai; Hiroyasu Kamei; Yang Zhao; Jun Ding; Zhou Du; Cunming Duan
Journal:  FASEB J       Date:  2010-01-15       Impact factor: 5.191
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