Literature DB >> 12804300

Cryptic species of planktonic foraminifera: their effect on palaeoceanographic reconstructions.

Michal Kucera1, Kate F Darling.   

Abstract

Shells of planktonic foraminifera recovered from marine sediments provide a multitude of important palaeoproxies. Most of these proxies are based on the assumption that each morphospecies of planktonic foraminifera represents a genetically continuous species with a unique habitat. Recent discovery of hitherto hidden genetic diversity among modern planktonic foraminifera has significant repercussions on palaeoproxies derived from their fossil shells. We have compiled all available data on this genetic diversity. To date, 33 cryptic genetic types were found in 9 out of the 22 sequenced morphospecies of modern planktonic foraminifera. An examination of this database suggests that cryptic genetic diversity may be a prevalent pattern among modern planktonic foraminifera, but that the total number of cryptic genetic types per morphospecies is not large and that most genetic types show a non-random pattern of distribution in the oceans. Using modern distribution data from the Atlantic Ocean as constraints, the relationship between abundances of three genetic types of Globigerina bulloides and sea-surface temperature has been modelled and this model has been applied to a database of species counts in Atlantic coretops (761 samples). Trials with artificial neural networks (ANNs), the modern analogue technique and Imbrie-Kipp transfer functions showed that the splitting of G. bulloides into three genetic types resulted in substantial reduction in the prediction error rate (by 5 to 34%) and that this improvement was by far greatest in ANN trials (on average more than 20%). We conclude that such a large reduction in error rate occurred because the models resonated with a real pattern in the original data. This study indicates that genetic diversity among planktonic foraminifera may become more of a gift than malaise to palaeoproxies. If it becomes possible to distinguish these genetic types in the fossil record, the accuracy of proxies based on planktonic foraminifera will indeed substantially increase.

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Year:  2002        PMID: 12804300     DOI: 10.1098/rsta.2001.0962

Source DB:  PubMed          Journal:  Philos Trans A Math Phys Eng Sci        ISSN: 1364-503X            Impact factor:   4.226


  15 in total

1.  Pseudo-cryptic speciation in coccolithophores.

Authors:  Alberto G Saez; Ian Probert; Markus Geisen; Patrick Quinn; Jeremy R Young; Linda K Medlin
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-20       Impact factor: 11.205

2.  Kinetic effects of temperature on rates of genetic divergence and speciation.

Authors:  Andrew P Allen; James F Gillooly; Van M Savage; James H Brown
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-05       Impact factor: 11.205

3.  Mating trials validate the use of DNA barcoding to reveal cryptic speciation of a marine bryozoan taxon.

Authors:  Africa Gómez; Peter J Wright; David H Lunt; Juan M Cancino; Gary R Carvalho; Roger N Hughes
Journal:  Proc Biol Sci       Date:  2007-01-22       Impact factor: 5.349

4.  Global molecular phylogeography reveals persistent Arctic circumpolar isolation in a marine planktonic protist.

Authors:  Kate F Darling; Michal Kucera; Christopher M Wade
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-13       Impact factor: 11.205

5.  Competition between cryptic species explains variations in rates of lineage evolution.

Authors:  Samuel Alizon; Michal Kucera; Vincent A A Jansen
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-19       Impact factor: 11.205

6.  Genetic and morphological divergence in the warm-water planktonic foraminifera genus Globigerinoides.

Authors:  Raphaël Morard; Angelina Füllberg; Geert-Jan A Brummer; Mattia Greco; Lukas Jonkers; André Wizemann; Agnes K M Weiner; Kate Darling; Michael Siccha; Ronan Ledevin; Hiroshi Kitazato; Thibault de Garidel-Thoron; Colomban de Vargas; Michal Kucera
Journal:  PLoS One       Date:  2019-12-05       Impact factor: 3.240

7.  Using the Multiple Analysis Approach to Reconstruct Phylogenetic Relationships among Planktonic Foraminifera from Highly Divergent and Length-polymorphic SSU rDNA Sequences.

Authors:  Ralf Aurahs; Markus Göker; Guido W Grimm; Vera Hemleben; Christoph Hemleben; Ralf Schiebel; Michal Kucera
Journal:  Bioinform Biol Insights       Date:  2009-11-11

8.  A Clustering Optimization Strategy for Molecular Taxonomy Applied to Planktonic Foraminifera SSU rDNA.

Authors:  Markus Göker; Guido W Grimm; Alexander F Auch; Ralf Aurahs; Michal Kučera
Journal:  Evol Bioinform Online       Date:  2010-09-09       Impact factor: 1.625

9.  Molecular evidence links cryptic diversification in polar planktonic protists to Quaternary climate dynamics.

Authors:  Kate F Darling; Michal Kucera; Carol J Pudsey; Christopher M Wade
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-10       Impact factor: 11.205

10.  Insights into biodiversity sampling strategies for freshwater microinvertebrate faunas through bioblitz campaigns and DNA barcoding.

Authors:  Brandon J Laforest; Amanda K Winegardner; Omar A Zaheer; Nicholas W Jeffery; Elizabeth E Boyle; Sarah J Adamowicz
Journal:  BMC Ecol       Date:  2013-04-04       Impact factor: 2.964

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