Literature DB >> 12801719

Transcription and the territory: the ins and outs of gene positioning.

Ruth R E Williams1.   

Abstract

When cells exit mitosis, the neat rod-like chromosomes decondense into their interphase state. However, the chromatin threads are not randomly dispersed throughout the nucleoplasm. Rather, individual chromosomes appear to be organized into discrete, non-overlapping "territories". Current studies attempt to unravel how gene loci are organized within these territories, whether their subterritorial positions are dependent on transcription, and the extent to which the loci can move.

Mesh:

Year:  2003        PMID: 12801719     DOI: 10.1016/S0168-9525(03)00109-4

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  15 in total

1.  Specific features in linear and spatial organizations of pericentromeric heterochromatin regions in polytene chromosomes of the closely related species Drosophila virilis and D. kanekoi (Diptera: Drosophilidae).

Authors:  Irina Wasserlauf; Konstantin Usov; Gleb Artemov; Tatyana Anan'ina; Vladimir Stegniy
Journal:  Genetica       Date:  2015-02-27       Impact factor: 1.082

Review 2.  Epigenetics and its implications for plant biology 2. The 'epigenetic epiphany': epigenetics, evolution and beyond.

Authors:  R T Grant-Downton; H G Dickinson
Journal:  Ann Bot       Date:  2005-10-31       Impact factor: 4.357

Review 3.  The genome and the nucleus: a marriage made by evolution. Genome organisation and nuclear architecture.

Authors:  Helen A Foster; Joanna M Bridger
Journal:  Chromosoma       Date:  2005-10-15       Impact factor: 4.316

4.  A novel role for Xist RNA in the formation of a repressive nuclear compartment into which genes are recruited when silenced.

Authors:  Julie Chaumeil; Patricia Le Baccon; Anton Wutz; Edith Heard
Journal:  Genes Dev       Date:  2006-08-15       Impact factor: 11.361

5.  Long-range interactions between three transcriptional enhancers, active Vkappa gene promoters, and a 3' boundary sequence spanning 46 kilobases.

Authors:  Zhe Liu; William T Garrard
Journal:  Mol Cell Biol       Date:  2005-04       Impact factor: 4.272

Review 6.  Cajal body function in genome organization and transcriptome diversity.

Authors:  Iain A Sawyer; David Sturgill; Myong-Hee Sung; Gordon L Hager; Miroslav Dundr
Journal:  Bioessays       Date:  2016-10-21       Impact factor: 4.345

7.  Radial chromatin positioning is shaped by local gene density, not by gene expression.

Authors:  Katrin Küpper; Alexandra Kölbl; Dorothee Biener; Sandra Dittrich; Johann von Hase; Tobias Thormeyer; Heike Fiegler; Nigel P Carter; Michael R Speicher; Thomas Cremer; Marion Cremer
Journal:  Chromosoma       Date:  2007-02-27       Impact factor: 4.316

8.  Gene expression profiling of fibroblasts from a human progeroid disease (mandibuloacral dysplasia, MAD #248370) through cDNA microarrays.

Authors:  Francesca Amati; Michela Biancolella; Maria Rosaria D'Apice; Stefano Gambardella; Ruggiero Mango; Paolo Sbraccia; Monica D'Adamo; Katia Margiotti; Annamaria Nardone; Marc Lewis; Giuseppe Novelli
Journal:  Gene Expr       Date:  2004

Review 9.  Gene regulation and large-scale chromatin organization in the nucleus.

Authors:  Niall Dillon
Journal:  Chromosome Res       Date:  2006       Impact factor: 5.239

10.  Chromatin domains and the interchromatin compartment form structurally defined and functionally interacting nuclear networks.

Authors:  Heiner Albiez; Marion Cremer; Cinzia Tiberi; Lorella Vecchio; Lothar Schermelleh; Sandra Dittrich; Katrin Küpper; Boris Joffe; Tobias Thormeyer; Johann von Hase; Siwei Yang; Karl Rohr; Heinrich Leonhardt; Irina Solovei; Christoph Cremer; Stanislav Fakan; Thomas Cremer
Journal:  Chromosome Res       Date:  2006-11-22       Impact factor: 4.620

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