Literature DB >> 12796486

Crystal structure of Pyrococcus furiosus phosphoglucose isomerase. Implications for substrate binding and catalysis.

John M Berrisford1, Jasper Akerboom, Andrew P Turnbull, Daniel de Geus, Svetlana E Sedelnikova, Ian Staton, Cameron W McLeod, Corne H Verhees, John van der Oost, David W Rice, Patrick J Baker.   

Abstract

Phosphoglucose isomerase (PGI) catalyzes the reversible isomerization between d-fructose 6-phosphate and d-glucose 6-phosphate as part of the glycolytic pathway. PGI from the Archaea Pyrococcus furiosus (Pfu) was crystallized, and its structure was determined by x-ray diffraction to a 2-A resolution. Structural comparison of this archaeal PGI with the previously solved structures of bacterial and eukaryotic PGIs reveals a completely different structure. Each subunit of the homodimeric Pfu PGI consists of a cupin domain, for which the overall structure is similar to other cupin domain-containing proteins, and includes a conserved transition metal-binding site. Biochemical data on the recombinant enzyme suggests that Fe2+ is bound to Pfu PGI. However, as catalytic activity is not strongly influenced either by the replacement of Fe2+ by a range of transition metals or by the presence or absence of the bound metal ion, we suggest that the metal may not be directly involved in catalysis but rather may be implicated in substrate recognition.

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Year:  2003        PMID: 12796486     DOI: 10.1074/jbc.M305170200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  9 in total

Review 1.  The unique features of glycolytic pathways in Archaea.

Authors:  Corné H Verhees; Servé W M Kengen; Judith E Tuininga; Gerrit J Schut; Michael W W Adams; Willem M De Vos; John Van Der Oost
Journal:  Biochem J       Date:  2003-10-15       Impact factor: 3.857

2.  Crystal structure of the YML079w protein from Saccharomyces cerevisiae reveals a new sequence family of the jelly-roll fold.

Authors:  Cong-Zhao Zhou; Philippe Meyer; Sophie Quevillon-Cheruel; Inès Li De La Sierra-Gallay; Bruno Collinet; Marc Graille; Karine Blondeau; Jean-Marie François; Nicolas Leulliot; Isabelle Sorel; Anne Poupon; Joel Janin; Herman Van Tilbeurgh
Journal:  Protein Sci       Date:  2005-01       Impact factor: 6.725

3.  Cupin-type phosphoglucose isomerases (Cupin-PGIs) constitute a novel metal-dependent PGI family representing a convergent line of PGI evolution.

Authors:  Thomas Hansen; Bettina Schlichting; Martina Felgendreher; Peter Schönheit
Journal:  J Bacteriol       Date:  2005-03       Impact factor: 3.490

4.  Crystal structure of the bacterial YhcH protein indicates a role in sialic acid catabolism.

Authors:  Alexey Teplyakov; Galina Obmolova; John Toedt; Michael Y Galperin; Gary L Gilliland
Journal:  J Bacteriol       Date:  2005-08       Impact factor: 3.490

Review 5.  Carbohydrate metabolism in Archaea: current insights into unusual enzymes and pathways and their regulation.

Authors:  Christopher Bräsen; Dominik Esser; Bernadette Rauch; Bettina Siebers
Journal:  Microbiol Mol Biol Rev       Date:  2014-03       Impact factor: 11.056

6.  The crystal structure of rabbit phosphoglucose isomerase complexed with D-sorbitol-6-phosphate, an analog of the open chain form of D-glucose-6-phosphate.

Authors:  Ji Hyun Lee; Constance J Jeffery
Journal:  Protein Sci       Date:  2005-02-02       Impact factor: 6.725

7.  Crystallization and preliminary crystallographic study of the phosphoglucose isomerase from Bacillus subtilis.

Authors:  Yian Liang Lee; TienHsiung Thomas Li
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-11-28

8.  Distant Non-Obvious Mutations Influence the Activity of a Hyperthermophilic Pyrococcus furiosus Phosphoglucose Isomerase.

Authors:  Kalyanasundaram Subramanian; Karolina Mitusińska; John Raedts; Feras Almourfi; Henk-Jan Joosten; Sjon Hendriks; Svetlana E Sedelnikova; Servé W M Kengen; Wilfred R Hagen; Artur Góra; Vitor A P Martins Dos Santos; Patrick J Baker; John van der Oost; Peter J Schaap
Journal:  Biomolecules       Date:  2019-05-31

9.  The 3-D Structural Basis for the Pgi Genotypic Differences in the Performance of the Butterfly Melitaea cinxia at Different Temperatures.

Authors:  Yuan Li; Stefan Andersson
Journal:  PLoS One       Date:  2016-07-27       Impact factor: 3.240

  9 in total

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