Literature DB >> 12787663

Inferring recent human phylogenies using forensic STR technology.

Diane J Rowold1, Rene J Herrera.   

Abstract

STR loci are characterized by extremely high mutation rates and thus, high levels of length polymorphism both within and among populations. In addition, much of the observed variation is believed to be nearly selectively neutral. Because of these features, STRs are ideal markers for genetic mapping, intra-species phylogenetic reconstructions and forensic analysis. In the present study, we investigate the application of five STR loci (CS1PO, TH01, TPOX, FGA and vWA) routinely used in forensic analysis for delineating the phylogenetic relationships of 10 human populations representing the three major racial groups (African-Caribbean, Croatian from the island of Hvar, East Asian, Han Chinese, Italian, Japanese, Portuguese, UK Caucasian, US Caucasian and Zimbabwe). The resulting tree topology exhibited strong geographic and racial partitioning consistent with that obtained with mtDNA haplotypes, Y-chromosome markers, SNPs, PAIs (polymorphic Alu insertions) as well as classic genetic polymorphisms. These findings suggest that forensic STR loci may be particularly powerful tools and provide the necessary fine resolution for the reconstruction of recent human evolutionary history.

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Year:  2003        PMID: 12787663     DOI: 10.1016/s0379-0738(03)00073-2

Source DB:  PubMed          Journal:  Forensic Sci Int        ISSN: 0379-0738            Impact factor:   2.395


  12 in total

1.  Population genetic analysis of 15 autosomal STR loci in the Russian population of northeastern Inner-Mongolia, China.

Authors:  Bo-feng Zhu; Guang Yang; Chun-mei Shen; Hai-xia Qin; Shuan-liang Fan; Li-bin Deng; Feng Chen; Li-ping Chen; Hong-dan Wang; Zhen-yuan Wang; Rudolf Lucas; Zhen-min Lian
Journal:  Mol Biol Rep       Date:  2010-05-08       Impact factor: 2.316

2.  Microsatellite data support subpopulation structuring among Basques.

Authors:  Ana M Pérez-Miranda; Miguel A Alfonso-Sánchez; Arif Kalantar; Susana García-Obregón; Marian M de Pancorbo; José A Peña; Rene J Herrera
Journal:  J Hum Genet       Date:  2005-08-30       Impact factor: 3.172

3.  Austronesian genetic signature in East African Madagascar and Polynesia.

Authors:  M Regueiro; S Mirabal; H Lacau; J L Caeiro; R L Garcia-Bertrand; R J Herrera
Journal:  J Hum Genet       Date:  2007-12-14       Impact factor: 3.172

4.  Genetic encapsulation among Near Eastern populations.

Authors:  Erica M Shepard; Rene J Herrera
Journal:  J Hum Genet       Date:  2006-03-24       Impact factor: 3.172

Review 5.  DNA reviews: predicting phenotype.

Authors:  Eleanor A M Graham
Journal:  Forensic Sci Med Pathol       Date:  2008-09-11       Impact factor: 2.007

6.  Afghanistan: conduits of human migrations identified using AmpFlSTR markers.

Authors:  Javier Rodriguez Luis; Harlette Lacau; Karima Fadhlaoui-Zid; Miguel A Alfonso-Sanchez; Ralph Garcia-Bertrand; Rene J Herrera
Journal:  Int J Legal Med       Date:  2019-03-07       Impact factor: 2.686

7.  Reconstructing recent human phylogenies with forensic STR loci: a statistical approach.

Authors:  Suraksha Agrawal; Faisal Khan
Journal:  BMC Genet       Date:  2005-09-28       Impact factor: 2.797

8.  At the southeast fringe of the Bantu expansion: genetic diversity and phylogenetic relationships to other sub-Saharan tribes.

Authors:  Diane Rowold; Ralph Garcia-Bertrand; Silvia Calderon; Luis Rivera; David Perez Benedico; Miguel A Alfonso Sanchez; Shilpa Chennakrishnaiah; Mangela Varela; Rene J Herrera
Journal:  Meta Gene       Date:  2014-10-02

9.  Human neutral genetic variation and forensic STR data.

Authors:  Nuno M Silva; Luísa Pereira; Estella S Poloni; Mathias Currat
Journal:  PLoS One       Date:  2012-11-21       Impact factor: 3.240

10.  Demographic changes and marker properties affect detection of human population differentiation.

Authors:  Jennifer B Listman; Robert T Malison; Atapol Sughondhabirom; Bao-Zhu Yang; Ryan L Raaum; Nuntika Thavichachart; Kittipong Sanichwankul; Henry R Kranzler; Sookjaroen Tangwonchai; Apiwat Mutirangura; Todd R Disotell; Joel Gelernter
Journal:  BMC Genet       Date:  2007-05-11       Impact factor: 2.797

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