Literature DB >> 12785304

Streptacidiphilus gen. nov., acidophilic actinomycetes with wall chemotype I and emendation of the family Streptomycetaceae (Waksman and Henrici (1943)AL) emend. Rainey et al. 1997.

Seung Bum Kim1, John Lonsdale, Chi-Nam Seong, Michael Goodfellow.   

Abstract

The taxonomic position of acidophilic actinomycetes selectively isolated from acidic soils and litter was examined using a polyphasic approach. The distinct 16S rDNA phyletic branch formed by representative strains was equated with related monophyletic clades that corresponded to the genera Kitasatospora and Streptomyces. The acidophilic isolates also exhibited a distinctive pH profile, a unique 16S rDNA signature, and contained major amounts of LL-diaminopimelic acid, galactose and rhamnose in whole-organism hydrolysates. It is proposed that these acidophilic actinomycetes be assigned to a new genus, Streptacidiphilus gen. nov., on the basis of genotypic and phenotypic differences. Three species were defined on the basis of DNA:DNA pairing and phenotypic data, namely, Streptacidiphilus albus sp. nov., the type species, Streptacidiphilus neutrinimicus sp. nov. and Streptacidiphilus carbonis sp. nov. Members of the genera Kitasatospora, Streptacidiphilus and Streptomyces share a number of key characteristics and form a stable monophyletic branch in the 16S rDNA tree. It is, therefore, proposed that the description of the family Streptomycetaceae be emended to account for properties shown by Kitasatospora and Streptacidiphilus species.

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Year:  2003        PMID: 12785304     DOI: 10.1023/a:1023397724023

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN: 0003-6072            Impact factor:   2.271


  26 in total

1.  Diversity and physiological properties of root endophytic actinobacteria in native herbaceous plants of Korea.

Authors:  Tae-Ui Kim; Sung-Heun Cho; Ji-Hye Han; Young Min Shin; Hyang Burm Lee; Seung Bum Kim
Journal:  J Microbiol       Date:  2012-02-27       Impact factor: 3.422

Review 2.  Taxonomy, Physiology, and Natural Products of Actinobacteria.

Authors:  Essaid Ait Barka; Parul Vatsa; Lisa Sanchez; Nathalie Gaveau-Vaillant; Cedric Jacquard; Jan P Meier-Kolthoff; Hans-Peter Klenk; Christophe Clément; Yder Ouhdouch; Gilles P van Wezel
Journal:  Microbiol Mol Biol Rev       Date:  2015-11-25       Impact factor: 11.056

3.  Allostreptomyces indica sp. nov., isolated from India.

Authors:  Amit Kumar Sahu; Syed Raziuddin Quadri; Dayanand Agasar; Jamal Al Ruwaili; Wen Jun-Li; Syed G Dastager
Journal:  J Antibiot (Tokyo)       Date:  2017-07-19       Impact factor: 2.649

4.  Red soils harbor diverse culturable actinomycetes that are promising sources of novel secondary metabolites.

Authors:  Xiaoxuan Guo; Ning Liu; Xiaomin Li; Yun Ding; Fei Shang; Yongsheng Gao; Jisheng Ruan; Ying Huang
Journal:  Appl Environ Microbiol       Date:  2015-02-27       Impact factor: 4.792

5.  Genome-Based Taxonomic Classification of the Phylum Actinobacteria.

Authors:  Imen Nouioui; Lorena Carro; Marina García-López; Jan P Meier-Kolthoff; Tanja Woyke; Nikos C Kyrpides; Rüdiger Pukall; Hans-Peter Klenk; Michael Goodfellow; Markus Göker
Journal:  Front Microbiol       Date:  2018-08-22       Impact factor: 5.640

6.  Acidophilic actinomycetes from rhizosphere soil: diversity and properties beneficial to plants.

Authors:  Nalin Poomthongdee; Kannika Duangmal; Wasu Pathom-aree
Journal:  J Antibiot (Tokyo)       Date:  2014-08-27       Impact factor: 2.649

7.  Draft Genome Sequence of Streptacidiphilus oryzae TH49T, an Acidophilic Actinobacterium Isolated from Soil.

Authors:  Yu Ri Kim; Sewook Park; Tae-Su Kim; Min-Kyeong Kim; Ji-Hye Han; Yochan Joung; Seung Bum Kim
Journal:  Genome Announc       Date:  2015-06-25

8.  Streptacidiphilus durhamensis sp. nov., isolated from a spruce forest soil.

Authors:  Patrycja Golinska; Lina Ahmed; Dylan Wang; Michael Goodfellow
Journal:  Antonie Van Leeuwenhoek       Date:  2013-05-30       Impact factor: 2.271

9.  Draft genome sequence of marine-derived Streptomyces sp. TP-A0598, a producer of anti-MRSA antibiotic lydicamycins.

Authors:  Hisayuki Komaki; Natsuko Ichikawa; Akira Hosoyama; Nobuyuki Fujita; Yasuhiro Igarashi
Journal:  Stand Genomic Sci       Date:  2015-08-26

10.  Presence of antioxidative agent, Pyrrolo[1,2-a]pyrazine-1,4-dione, hexahydro- in newly isolated Streptomyces mangrovisoli sp. nov.

Authors:  Hooi-Leng Ser; Uma D Palanisamy; Wai-Fong Yin; Sri N Abd Malek; Kok-Gan Chan; Bey-Hing Goh; Learn-Han Lee
Journal:  Front Microbiol       Date:  2015-08-20       Impact factor: 5.640

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