Literature DB >> 12783544

Light-driven decarboxylation of wild-type green fluorescent protein.

Alasdair F Bell1, Deborah Stoner-Ma, Rebekka M Wachter, Peter J Tonge.   

Abstract

The response of wild-type GFP to UV and visible light was investigated using steady state absorption, fluorescence, and Raman spectroscopies. As reported previously [van Thor, Nat. Struct. Biol. 2002, 9, 37-41], irradiation of GFP results in decarboxylation of E222. Here it is reported that the rate of the light-driven decarboxylation reaction strongly depends on the excitation wavelength, decreasing in the order 254 nm > 280 nm > 476 nm. The relative efficiencies of decarboxylation are explained in terms of the Kolbe-type mechanism in which the excited state of the chromophore acts as an oxidant by accepting an electron from E222. Specifically, it is proposed that 254 nm excitation populates the S2 (or higher) excited state of the chromophore, whereas 404 and 476 nm excitation populate the S1 excited state of neutral and anionic forms, respectively, and that the relative oxidizing power of the three excited states controls the rate of the decarboxylation reaction. In addition, the role of W57 in the photophysics of GFP has been probed by mutating this residue to phenylalanine. These studies reveal that while W57 does not affect decarboxylation, this residue is involved in resonance energy transfer with the chromophore, thereby partially explaining the green fluorescence observed upon UV irradiation of wild-type GFP. Finally, comparison of Raman spectra obtained from nonilluminated and decarboxylated forms of wild-type GFP has provided further vibrational band assignments for neutral and anionic forms of the chromophore within the protein. In addition, these spectra provide valuable insight into the specific interactions between the protein and the chromophore that control the optical properties of wild-type GFP.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12783544     DOI: 10.1021/ja034588w

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  20 in total

1.  Experimental evolution of a green fluorescent protein composed of 19 unique amino acids without tryptophan.

Authors:  Akio Kawahara-Kobayashi; Mitsuhiro Hitotsuyanagi; Kazuaki Amikura; Daisuke Kiga
Journal:  Orig Life Evol Biosph       Date:  2014-11-16       Impact factor: 1.950

2.  The photophysics of green fluorescent protein: influence of the key amino acids at positions 65, 203, and 222.

Authors:  Gregor Jung; Jens Wiehler; Andreas Zumbusch
Journal:  Biophys J       Date:  2004-12-21       Impact factor: 4.033

3.  Vibrational analysis of a solvated green fluorescent protein chromophore.

Authors:  Tadeusz Andruniów
Journal:  J Mol Model       Date:  2007-03-23       Impact factor: 1.810

4.  Molecular tools for cell and systems biology.

Authors:  Carsten Schultz
Journal:  HFSP J       Date:  2007-11-29

5.  Ultrafast photoconversion of the green fluorescent protein studied by accumulative femtosecond spectroscopy.

Authors:  Florian Langhojer; Frank Dimler; Gregor Jung; Tobias Brixner
Journal:  Biophys J       Date:  2009-04-08       Impact factor: 4.033

6.  Improving the photostability of bright monomeric orange and red fluorescent proteins.

Authors:  Nathan C Shaner; Michael Z Lin; Michael R McKeown; Paul A Steinbach; Kristin L Hazelwood; Michael W Davidson; Roger Y Tsien
Journal:  Nat Methods       Date:  2008-05-04       Impact factor: 28.547

7.  Photophysical properties of Cerulean and Venus fluorescent proteins.

Authors:  Pabak Sarkar; Srinagesh V Koushik; Steven S Vogel; Ignacy Gryczynski; Zygmunt Gryczynski
Journal:  J Biomed Opt       Date:  2009 May-Jun       Impact factor: 3.170

8.  Mechanism and bottlenecks in strand photodissociation of split green fluorescent proteins (GFPs).

Authors:  Chi-Yun Lin; Johan Both; Keunbong Do; Steven G Boxer
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-27       Impact factor: 11.205

9.  Singlet oxygen photosensitization by EGFP and its chromophore HBDI.

Authors:  Ana Jiménez-Banzo; Santi Nonell; Johan Hofkens; Cristina Flors
Journal:  Biophys J       Date:  2007-08-31       Impact factor: 4.033

Review 10.  Chromophore chemistry of fluorescent proteins controlled by light.

Authors:  Daria M Shcherbakova; Vladislav V Verkhusha
Journal:  Curr Opin Chem Biol       Date:  2014-05-13       Impact factor: 8.822

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.