Literature DB >> 12769717

Nano-mechanical methods in biochemistry using atomic force microscopy.

Atsushi Ikai1, Rehana Afrin, Hiroshi Sekiguchi, Takaharu Okajima, M T Alam, Shuhei Nishida.   

Abstract

The atomic force microscope has been extensively used not only to image nanometer-sized biological samples but also to measure their mechanical properties by using the force curve mode of the instrument. When the analysis based on the Hertz model of indentation is applied to the approach part of the force curve, one obtains information on the stiffness of the sample in terms of Young's modulus. Mapping of local stiffness over a single living cell is possible by this method. The retraction part of the force curve provides information on the adhesive interaction between the sample and the AFM tip. It is possible to functionalize the AFM tip with specific ligands so that one can target the adhesive interaction to specific pairs of ligands and receptors. The presence of specific receptors on the living cell surface has been mapped by this method. The force to break the co-operative 3D structure of globular proteins or to separate a double stranded DNA into single strands has been measured. Extension of the method for harvesting functional molecules from the cytosol or the cell surface for biochemical analysis has been reported. There is a need for the development of biochemical nano-analysis based on AFM technology.

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Year:  2003        PMID: 12769717     DOI: 10.2174/1389203033487171

Source DB:  PubMed          Journal:  Curr Protein Pept Sci        ISSN: 1389-2037            Impact factor:   3.272


  6 in total

1.  A stochastic, cantilever approach to the evaluation of solution phase thermodynamic quantities.

Authors:  Phillip W Snyder; Gwangrog Lee; Piotr E Marszalek; Robert L Clark; Eric J Toone
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-16       Impact factor: 11.205

Review 2.  Nuclear architecture and chromatin dynamics revealed by atomic force microscopy in combination with biochemistry and cell biology.

Authors:  Yasuhiro Hirano; Hirohide Takahashi; Masahiro Kumeta; Kohji Hizume; Yuya Hirai; Shotaro Otsuka; Shige H Yoshimura; Kunio Takeyasu
Journal:  Pflugers Arch       Date:  2008-01-03       Impact factor: 3.657

3.  Elastic Properties of the Annular Ligament of the Human Stapes--AFM Measurement.

Authors:  Monika Kwacz; Zygmunt Rymuza; Marcin Michałowski; Jarosław Wysocki
Journal:  J Assoc Res Otolaryngol       Date:  2015-06-04

4.  Corneal stromal elasticity and viscoelasticity assessed by atomic force microscopy after different cross linking protocols.

Authors:  Janice Dias; Vasilios F Diakonis; Michael Lorenzo; Felipe Gonzalez; Kevin Porras; Simone Douglas; Marcel Avila; Sonia H Yoo; Noël M Ziebarth
Journal:  Exp Eye Res       Date:  2015-06-17       Impact factor: 3.467

5.  HIC1 and RassF1A Methylation Attenuates Tubulin Expression and Cell Stiffness in Cancer.

Authors:  Chih-Cheng Chen; Bo-Ching He; Yao-Li Chen; Kuan-Der Lee; Chun-Hsin Tung; Chia-Chen Hsu; Ping-Yi Lin; Pei-Yi Chu; Yu-Wei Leu; Wei-En Fu; Shu-Huei Hsiao
Journal:  Int J Mol Sci       Date:  2018-09-22       Impact factor: 5.923

6.  Acute and chronic demyelinated CNS lesions exhibit opposite elastic properties.

Authors:  Mateusz M Urbanski; Matthew B Brendel; Carmen V Melendez-Vasquez
Journal:  Sci Rep       Date:  2019-01-30       Impact factor: 4.379

  6 in total

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