Literature DB >> 12769561

Secondary losses via gamma-lactam formation in hot electron capture dissociation: a missing link to complete de novo sequencing of proteins?

Frank Kjeldsen1, Roman Zubarev.   

Abstract

Differentiating between the isomeric isoleucine and leucine amino acid residues can be accomplished by a gas-phase fragmentation reaction in which an N-terminal radical site of a C-terminal fragment initiates formation of a five-membered ring with the beta-carbon in the adjacent residue.

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Year:  2003        PMID: 12769561     DOI: 10.1021/ja035042c

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  18 in total

1.  Electron capture dissociation distinguishes a single D-amino acid in a protein and probes the tertiary structure.

Authors:  Christopher M Adams; Frank Kjeldsen; Roman A Zubarev; Bogdan A Budnik; Kim F Haselmann
Journal:  J Am Soc Mass Spectrom       Date:  2004-07       Impact factor: 3.109

2.  Dissociation channel dependence on peptide size observed in electron capture dissociation of tryptic peptides.

Authors:  Guillaume van der Rest; Renjie Hui; Gilles Frison; Julia Chamot-Rooke
Journal:  J Am Soc Mass Spectrom       Date:  2011-06-04       Impact factor: 3.109

3.  Effects of peptide backbone amide-to-ester bond substitution on the cleavage frequency in electron capture dissociation and collision-activated dissociation.

Authors:  Frank Kjeldsen; Roman A Zubarev
Journal:  J Am Soc Mass Spectrom       Date:  2011-05-05       Impact factor: 3.109

4.  Transition metal ions: charge carriers that mediate the electron capture dissociation pathways of peptides.

Authors:  Xiangfeng Chen; Yi Man Eva Fung; Wai Yi Kelly Chan; Pui Shuen Wong; Hoi Sze Yeung; T-W Dominic Chan
Journal:  J Am Soc Mass Spectrom       Date:  2011-09-28       Impact factor: 3.109

5.  Charge remote fragmentation in electron capture and electron transfer dissociation.

Authors:  Xiaojuan Li; Cheng Lin; Liang Han; Catherine E Costello; Peter B O'Connor
Journal:  J Am Soc Mass Spectrom       Date:  2010-01-18       Impact factor: 3.109

6.  Characterization of an N-acylated glucagon-like peptide-1 derivative by electron capture dissociation.

Authors:  Kim F Haselmann; Per F Nielsen; Roman A Zubarev
Journal:  J Am Soc Mass Spectrom       Date:  2005-04       Impact factor: 3.109

7.  Sulfopeptide fragmentation in electron-capture and electron-transfer dissociation.

Authors:  K F Medzihradszky; S Guan; D A Maltby; A L Burlingame
Journal:  J Am Soc Mass Spectrom       Date:  2007-06-19       Impact factor: 3.109

8.  Probing the gas-phase folding kinetics of peptide ions by IR activated DR-ECD.

Authors:  Cheng Lin; Jason J Cournoyer; Peter B O'Connor
Journal:  J Am Soc Mass Spectrom       Date:  2008-01-25       Impact factor: 3.109

9.  Toward proteome-scale identification and quantification of isoaspartyl residues in biological samples.

Authors:  Hongqian Yang; Eva Y M Fung; Alexander R Zubarev; Roman A Zubarev
Journal:  J Proteome Res       Date:  2009-10       Impact factor: 4.466

10.  Backbone and side-chain specific dissociations of z ions from non-tryptic peptides.

Authors:  Thomas W Chung; Frantisek Turecek
Journal:  J Am Soc Mass Spectrom       Date:  2010-02-18       Impact factor: 3.109

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