Literature DB >> 12766413

Direct measurement of the 15N CSA/dipolar relaxation interference from coupled HSQC spectra.

Jennifer B Hall1, Kwaku T Dayie, David Fushman.   

Abstract

Here we propose a method for the measurement of the (15)N CSA/dipolar relaxation interference based on direct comparison of the (15)N doublet components observed in a (1)H-coupled (1)H-(15)N HSQC-type spectrum. This allows the determination of the cross-correlation rates with no need for correction factors associated with other methods. The signal overlap problem of coupled HSQC spectra is addressed here by using the IPAP scheme (Ottiger et al., 1998). The approach is applied to the B3 domain of protein G to show that the method provides accurate measurements of the (15)N CSA/dipolar cross-correlation rates.

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Year:  2003        PMID: 12766413     DOI: 10.1023/a:1023546107553

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  6 in total

Review 1.  Cross-correlated relaxation for measurement of angles between tensorial interactions.

Authors:  H Schwalbe; T Carlomagno; M Hennig; J Junker; B Reif; C Richter; C Griesinger
Journal:  Methods Enzymol       Date:  2001       Impact factor: 1.600

2.  Improved estimation of CSA-dipolar coupling cross-correlation rates from laboratory-frame relaxation experiments

Authors: 
Journal:  J Magn Reson       Date:  1998-10       Impact factor: 2.229

Review 3.  Measurement of J and dipolar couplings from simplified two-dimensional NMR spectra.

Authors:  M Ottiger; F Delaglio; A Bax
Journal:  J Magn Reson       Date:  1998-04       Impact factor: 2.229

4.  Base flexibility in HIV-2 TAR RNA mapped by solution (15)N, (13)C NMR relaxation.

Authors:  Kwaku T Dayie; Alexander S Brodsky; James R Williamson
Journal:  J Mol Biol       Date:  2002-03-22       Impact factor: 5.469

5.  The program XEASY for computer-supported NMR spectral analysis of biological macromolecules.

Authors:  C Bartels; T H Xia; M Billeter; P Güntert; K Wüthrich
Journal:  J Biomol NMR       Date:  1995-07       Impact factor: 2.835

6.  The main-chain dynamics of the dynamin pleckstrin homology (PH) domain in solution: analysis of 15N relaxation with monomer/dimer equilibration.

Authors:  D Fushman; S Cahill; D Cowburn
Journal:  J Mol Biol       Date:  1997-02-14       Impact factor: 5.469

  6 in total
  13 in total

1.  Variability of the 15N chemical shielding tensors in the B3 domain of protein G from 15N relaxation measurements at several fields. Implications for backbone order parameters.

Authors:  Jennifer B Hall; David Fushman
Journal:  J Am Chem Soc       Date:  2006-06-21       Impact factor: 15.419

2.  Simultaneous alpha/beta spin-state selection for (13)C and (15)N from a time-shared HSQC-IPAP experiment.

Authors:  Pau Nolis; Teodor Parella
Journal:  J Biomol NMR       Date:  2006-12-12       Impact factor: 2.835

3.  Characterization of the overall and local dynamics of a protein with intermediate rotational anisotropy: Differentiating between conformational exchange and anisotropic diffusion in the B3 domain of protein G.

Authors:  Jennifer B Hall; David Fushman
Journal:  J Biomol NMR       Date:  2003-11       Impact factor: 2.835

4.  relaxGUI: a new software for fast and simple NMR relaxation data analysis and calculation of ps-ns and μs motion of proteins.

Authors:  Michael Bieri; Edward J d'Auvergne; Paul R Gooley
Journal:  J Biomol NMR       Date:  2011-05-27       Impact factor: 2.835

5.  Determination of 15N chemical shift anisotropy from a membrane-bound protein by NMR spectroscopy.

Authors:  Manoj Kumar Pandey; Subramanian Vivekanandan; Shivani Ahuja; Kumar Pichumani; Sang-Choul Im; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  J Phys Chem B       Date:  2012-06-04       Impact factor: 2.991

6.  Spectral density mapping protocols for analysis of molecular motions in disordered proteins.

Authors:  Pavel Kadeřávek; Vojtěch Zapletal; Alžbeta Rabatinová; Libor Krásný; Vladimír Sklenář; Lukáš Žídek
Journal:  J Biomol NMR       Date:  2014-02-11       Impact factor: 2.835

7.  Spin-state selection for increased confidence in cross-correlation rates measurements.

Authors:  Paul R Vasos; Jennifer B Hall; David Fushman
Journal:  J Biomol NMR       Date:  2005-02       Impact factor: 2.835

8.  Measurement of 15N csa/dipolar cross-correlation rates by means of Spin State Selective experiments.

Authors:  Sabine Bouguet-Bonnet; Pierre Mutzenhardt; Daniel Canet
Journal:  J Biomol NMR       Date:  2004-10       Impact factor: 2.835

9.  Solution structure of the complex between poxvirus-encoded CC chemokine inhibitor vCCI and human MIP-1beta.

Authors:  Li Zhang; Michele Derider; Melissa A McCornack; Shu-Chuan Jao; Nancy Isern; Traci Ness; Richard Moyer; Patricia J LiWang
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-08       Impact factor: 11.205

10.  Direct measurement of dipole-dipole/CSA cross-correlated relaxation by a constant-time experiment.

Authors:  Yizhou Liu; James H Prestegard
Journal:  J Magn Reson       Date:  2008-03-27       Impact factor: 2.229

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