Literature DB >> 12764140

Transcriptional elongation by RNA polymerase II and histone methylation.

Mark Gerber1, Ali Shilatifard.   

Abstract

mRNA synthesis in eukaryotic organisms is a key biological process that is regulated at multiple levels. From the covalent modifications of chromatin by a number of chromatin remodeling complexes during the initiation and activation steps of transcription to the processing of mRNA transcripts, a very large consortium of proteins and multiprotein complexes is critical for gene expression by RNA polymerase II. The list of proteins essential for the successful synthesis of mRNA continues to grow at a rapid pace. Recent advances in this area of research have been focused on transcription through chromatin. In this article, we will review the recent literature linking the key biochemical process of transcriptional elongation by RNA polymerase II to histone methylation by COMPASS, Dot1p, and Set2 methyltransferases.

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Year:  2003        PMID: 12764140     DOI: 10.1074/jbc.R300014200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  63 in total

Review 1.  The COMPASS family of histone H3K4 methylases: mechanisms of regulation in development and disease pathogenesis.

Authors:  Ali Shilatifard
Journal:  Annu Rev Biochem       Date:  2012       Impact factor: 23.643

2.  Distinct localization of histone H3 acetylation and H3-K4 methylation to the transcription start sites in the human genome.

Authors:  Gangning Liang; Joy C Y Lin; Vivian Wei; Christine Yoo; Jonathan C Cheng; Carvell T Nguyen; Daniel J Weisenberger; Gerda Egger; Daiya Takai; Felicidad A Gonzales; Peter A Jones
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-03       Impact factor: 11.205

3.  Intragenic transcription of a noncoding RNA modulates expression of ASP3 in budding yeast.

Authors:  Yu-Ching Huang; Hung-Ta Chen; Shu-Chun Teng
Journal:  RNA       Date:  2010-09-03       Impact factor: 4.942

Review 4.  Architectural and Functional Commonalities between Enhancers and Promoters.

Authors:  Tae-Kyung Kim; Ramin Shiekhattar
Journal:  Cell       Date:  2015-08-27       Impact factor: 41.582

5.  Pdx-1 links histone H3-Lys-4 methylation to RNA polymerase II elongation during activation of insulin transcription.

Authors:  Joshua Francis; Swarup K Chakrabarti; James C Garmey; Raghavendra G Mirmira
Journal:  J Biol Chem       Date:  2005-09-01       Impact factor: 5.157

6.  Drosophila Paf1 modulates chromatin structure at actively transcribed genes.

Authors:  Karen Adelman; Wenxiang Wei; M Behfar Ardehali; Janis Werner; Bing Zhu; Danny Reinberg; John T Lis
Journal:  Mol Cell Biol       Date:  2006-01       Impact factor: 4.272

Review 7.  Multi-tasking on chromatin with the SAGA coactivator complexes.

Authors:  Jeremy A Daniel; Patrick A Grant
Journal:  Mutat Res       Date:  2007-01-21       Impact factor: 2.433

8.  Wdr82 is a C-terminal domain-binding protein that recruits the Setd1A Histone H3-Lys4 methyltransferase complex to transcription start sites of transcribed human genes.

Authors:  Jeong-Heon Lee; David G Skalnik
Journal:  Mol Cell Biol       Date:  2007-11-12       Impact factor: 4.272

9.  Monomethyl histone H3 lysine 4 as an epigenetic mark for silenced euchromatin in Chlamydomonas.

Authors:  Karin van Dijk; Katherine E Marley; Byeong-ryool Jeong; Jianping Xu; Jennifer Hesson; Ronald L Cerny; Jakob H Waterborg; Heriberto Cerutti
Journal:  Plant Cell       Date:  2005-08-12       Impact factor: 11.277

10.  The Saccharomyces cerevisiae histone demethylase Jhd1 fine-tunes the distribution of H3K36me2.

Authors:  Jia Fang; Gregory J Hogan; Gaoyang Liang; Jason D Lieb; Yi Zhang
Journal:  Mol Cell Biol       Date:  2007-04-30       Impact factor: 4.272

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