Literature DB >> 12750895

Elimination of response latency variability in neuronal spike trains.

Martin P Nawrot1, Ad Aertsen, Stefan Rotter.   

Abstract

Neuronal activity in the mammalian cortex exhibits a considerable amount of trial-by-trial variability. This may be reflected by the magnitude of the activity as well as by the response latency with respect to an external event, such as the onset of a sensory stimulus, or a behavioral event. Here we present a novel nonparametric method for estimating trial-by-trial differences in response latency from neuronal spike trains. The method makes use of the dynamic rate profile for each single trial and maximizes their total pairwise correlation by appropriately shifting all trials in time. The result is a new alignment of trials that largely eliminates the variability in response latency and provides a new internal trigger that is independent of experiment time. To calibrate the method, we simulated spike trains based on stochastic point processes using a parametric model for phasic response profiles. We illustrate the method by an application to simultaneous recordings from a pair of neurons in the motor cortex of a behaving monkey. It is demonstrated how the method can be used to study the temporal relation of the neuronal response to the experiment, to investigate whether neurons share the same dynamics, and to improve spike correlation analysis. Differences between this and other previously published methods are discussed.

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Year:  2003        PMID: 12750895     DOI: 10.1007/s00422-002-0391-5

Source DB:  PubMed          Journal:  Biol Cybern        ISSN: 0340-1200            Impact factor:   2.086


  13 in total

Review 1.  Techniques for extracting single-trial activity patterns from large-scale neural recordings.

Authors:  Mark M Churchland; Byron M Yu; Maneesh Sahani; Krishna V Shenoy
Journal:  Curr Opin Neurobiol       Date:  2007-10       Impact factor: 6.627

2.  Feature extraction from spike trains with Bayesian binning: 'latency is where the signal starts'.

Authors:  Dominik Endres; Mike Oram
Journal:  J Comput Neurosci       Date:  2009-05-16       Impact factor: 1.621

Review 3.  Data-driven significance estimation for precise spike correlation.

Authors:  Sonja Grün
Journal:  J Neurophysiol       Date:  2009-01-07       Impact factor: 2.714

4.  Elemental and configural olfactory coding by antennal lobe neurons of the honeybee (Apis mellifera).

Authors:  Anneke Meyer; C Giovanni Galizia
Journal:  J Comp Physiol A Neuroethol Sens Neural Behav Physiol       Date:  2011-11-15       Impact factor: 1.836

5.  Quantifying neural coding of event timing.

Authors:  Demetris S Soteropoulos; Stuart N Baker
Journal:  J Neurophysiol       Date:  2008-11-19       Impact factor: 2.714

6.  Discovering spike patterns in neuronal responses.

Authors:  Jean-Marc Fellous; Paul H E Tiesinga; Peter J Thomas; Terrence J Sejnowski
Journal:  J Neurosci       Date:  2004-03-24       Impact factor: 6.167

7.  Parametric models to relate spike train and LFP dynamics with neural information processing.

Authors:  Arpan Banerjee; Heather L Dean; Bijan Pesaran
Journal:  Front Comput Neurosci       Date:  2012-07-24       Impact factor: 2.380

8.  Rapid odor processing in the honeybee antennal lobe network.

Authors:  Sabine Krofczik; Randolf Menzel; Martin P Nawrot
Journal:  Front Comput Neurosci       Date:  2009-01-15       Impact factor: 2.380

Review 9.  Parallel processing in the honeybee olfactory pathway: structure, function, and evolution.

Authors:  Wolfgang Rössler; Martin F Brill
Journal:  J Comp Physiol A Neuroethol Sens Neural Behav Physiol       Date:  2013-04-23       Impact factor: 1.836

Review 10.  Processing and Analysis of Multichannel Extracellular Neuronal Signals: State-of-the-Art and Challenges.

Authors:  Mufti Mahmud; Stefano Vassanelli
Journal:  Front Neurosci       Date:  2016-06-02       Impact factor: 4.677

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