Literature DB >> 12748785

AFLP genetic polymorphism in wild barley (Hordeum spontaneum) populations in Israel.

T Turpeinen1, T Vanhala, E Nevo, E Nissilä.   

Abstract

The genetic diversity produced by the amplified fragment length polymorphism (AFLP) method was studied in 94 genotypes of wild barley, Hordeum spontaneum (C. Koch) Thell., originating from ten ecologically and geographically different locations in Israel. Eight primer pairs produced 204 discernible loci of which 189 (93%) were polymorphic. Each genotype had a unique banding profile and the genetic similarity coefficient varied between 0.74 and 0.98. The phenogram generated from these similarities by the UPGMA method did not group genotypes strictly according to their geographical origin, which pattern was also seen in the principal coordinate (PCO) plot. Genetic diversity was larger within (69%) than among (31%) populations. Associations between ecogeographical variables and the mean gene diversity were found at one primer pair. The results are discussed and compared with data obtained by the simple sequence repeat (SSR) method.

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Year:  2003        PMID： 12748785     DOI： 10.1007/s00122-002-1151-6

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN： 0040-5752            Impact factor:   5.699


  15 in total

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Journal:  Nucleic Acids Res       Date:  1995-11-11       Impact factor: 16.971

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Journal:  Mol Gen Genet       Date:  1997-07

5.  Microsatellite diversity associated with ecological factors in Hordeum spontaneum populations in Israel.

Authors:  T Turpeinen; T Tenhola; O Manninen; E Nevo; E Nissilä
Journal:  Mol Ecol       Date:  2001-06       Impact factor: 6.185

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Authors:  I K Dawson; K J Chalmers; R Waugh; W Powell
Journal:  Mol Ecol       Date:  1993-06       Impact factor: 6.185

8.  Combined mapping of AFLP and RFLP markers in barley.

Authors:  J Becker; P Vos; M Kuiper; F Salamini; M Heun
Journal:  Mol Gen Genet       Date:  1995-11-01

9.  AFLP variation in wild barley (Hordeum spontaneum C. Koch) with reference to salt tolerance and associated ecogeography.

Authors:  H Pakniyat; W Powell; E Baird; L L Handley; D Robinson; C M Scrimgeour; C A Hackett; B P Forster; E Nevo; P D Caligari
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Authors:  P Donini; R M Koebner; M L Elias; S M Bougourd
Journal:  Genome       Date:  1997-08       Impact factor: 2.166
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8.  Geography of Genetic Structure in Barley Wild Relative Hordeum vulgare subsp. spontaneum in Jordan.

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Journal:  PLoS One       Date:  2016-08-11       Impact factor: 3.240
  8 in total

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