Literature DB >> 12748394

Profiling of cyclic hexadepsipeptides roseotoxins synthesized in vitro and in vivo: a combined tandem mass spectrometry and quantum chemical study.

Alexandr Jegorov1, Béla Paizs, Martin Zabka, Marek Kuzma, Vladimír Havlícek, Anastassios E Giannakopulos, Peter J Derrick.   

Abstract

High-performance liquid chromatography and tandem mass spectrometry (HPLC/MS/MS) was used for the detection of cyclic hexadepsipeptides roseotoxins produced by Trichothecium roseum. Roseotoxins were found in both submerged standard cultivation on CzapekDox medium and in vivo cultivation extract obtained from an apple. Roseotoxin chromatographic profiles from these two experiments were compared. Product-ion collision-induced dissociation (CID) spectra obtained on an ion trap (electrospray ionisation, ESI) were used for the identification of natural roseotoxins A, B, C and of minor destruxins A and B. The dissociation behavior of roseotoxins is discussed in terms of a fragmentation scheme proposed for describing the dissociation pathways of cyclic peptides. This scheme involves opening of the cyclopeptide ring via formation of oxazolone derivatives and fragmentation of the resulting linear species, which have a free N-terminus and an oxazolone ring at the C-terminus. Some aspects of this fragmentation scheme are underlined by modeling the dissociation channels of roseotoxin A using quantum chemical calculations. The structures of roseotoxin A and destruxin B were verified by nuclear magnetic resonance (NMR) spectroscopy. Structures of three new minor natural roseotoxins [Val(4)]RosA, [MeLxx(4)]RosA and [MeLxx(4)]RosB were deduced by ion cyclotron resonance Fourier transform mass spectrometry (ICR-FT-MS) and ion trap tandem mass spectrometry by examining the pre-separated roseotoxin fraction.

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Year:  2003        PMID: 12748394     DOI: 10.1255/ejms.531

Source DB:  PubMed          Journal:  Eur J Mass Spectrom (Chichester)        ISSN: 1469-0667            Impact factor:   1.067


  9 in total

1.  CYCLONE--a utility for de novo sequencing of microbial cyclic peptides.

Authors:  Daniel Kavan; Marek Kuzma; Karel Lemr; Kevin A Schug; Vladimir Havlicek
Journal:  J Am Soc Mass Spectrom       Date:  2013-05-24       Impact factor: 3.109

2.  Sequence elucidation of an unknown cyclic peptide of high doping potential by ETD and CID tandem mass spectrometry.

Authors:  Fuyu Guan; Cornelius E Uboh; Lawrence R Soma; Jeffrey Rudy
Journal:  J Am Soc Mass Spectrom       Date:  2011-02-18       Impact factor: 3.109

3.  Direct evidence of plant-pathogenic activity of fungal metabolites of Trichothecium roseum on apple.

Authors:  Martin Zabka; Kamila Drastichová; Alexandr Jegorov; Julie Soukupová; Ladislav Nedbal
Journal:  Mycopathologia       Date:  2006-07       Impact factor: 2.574

4.  Histone deacetylase inhibitors as a tool to up-regulate new fungal biosynthetic products: isolation of EGM-556, a cyclodepsipeptide, from Microascus sp.

Authors:  Hélène C Vervoort; Marija Drašković; Phillip Crews
Journal:  Org Lett       Date:  2010-12-21       Impact factor: 6.005

5.  Identification of alpha- and beta-hydroxy acid containing cyclodepsipeptides in natural peptide mixtures using negative ion mass spectrometry.

Authors:  Suman S Thakur; Rappal S Ranganayaki; Kallol Gupta; Padmanabhan Balaram
Journal:  J Am Soc Mass Spectrom       Date:  2009-08-27       Impact factor: 3.109

6.  Towards understanding the tandem mass spectra of protonated oligopeptides. 1: mechanism of amide bond cleavage.

Authors:  Béla Paizs; Sándor Suhai
Journal:  J Am Soc Mass Spectrom       Date:  2004-01       Impact factor: 3.109

7.  MassSpecBlocks: a web-based tool to create building blocks and sequences of nonribosomal peptides and polyketides for tandem mass spectra analysis.

Authors:  Jan Přívratský; Jiří Novák
Journal:  J Cheminform       Date:  2021-07-07       Impact factor: 5.514

8.  Interpretation of tandem mass spectra obtained from cyclic nonribosomal peptides.

Authors:  Wei-Ting Liu; Julio Ng; Dario Meluzzi; Nuno Bandeira; Marcelino Gutierrez; Thomas L Simmons; Andrew W Schultz; Roger G Linington; Bradley S Moore; William H Gerwick; Pavel A Pevzner; Pieter C Dorrestein
Journal:  Anal Chem       Date:  2009-06-01       Impact factor: 6.986

Review 9.  Structural Diversity and Biological Activities of Cyclic Depsipeptides from Fungi.

Authors:  Xiaohan Wang; Xiao Gong; Peng Li; Daowan Lai; Ligang Zhou
Journal:  Molecules       Date:  2018-01-15       Impact factor: 4.411

  9 in total

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