Literature DB >> 12740578

Trans allele methylation and paramutation-like effects in mice.

Herry Herman1, Michael Lu, Melly Anggraini, Aimee Sikora, Yanjie Chang, Bong June Yoon, Paul D Soloway.   

Abstract

In mammals, imprinted genes have parent-of-origin-specific patterns of DNA methylation that cause allele-specific expression. At Rasgrf1 (encoding RAS protein-specific guanine nucleotide-releasing factor 1), a repeated DNA element is needed to establish methylation and expression of the active paternal allele. At Igf2r (encoding insulin-like growth factor 2 receptor), a sequence called region 2 is needed for methylation of the active maternal allele. Here we show that replacing the Rasgrf1 repeats on the paternal allele with region 2 allows both methylation and expression of the paternal copy of Rasgrf1, indicating that sequences that control methylation can function ectopically. Paternal transmission of the mutated allele also induced methylation and expression in trans of the normally unmethylated and silent wild-type maternal allele. Once activated, the wild-type maternal Rasgrf1 allele maintained its activated state in the next generation independently of the paternal allele. These results recapitulate in mice several features in common with paramutation described in plants.

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Year:  2003        PMID: 12740578      PMCID: PMC2744043          DOI: 10.1038/ng1162

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  21 in total

Review 1.  Transvection in Drosophila.

Authors:  James A Kennison; Jeffrey W Southworth
Journal:  Adv Genet       Date:  2002       Impact factor: 1.944

2.  The non-coding Air RNA is required for silencing autosomal imprinted genes.

Authors:  Frank Sleutels; Ronald Zwart; Denise P Barlow
Journal:  Nature       Date:  2002-02-14       Impact factor: 49.962

Review 3.  Paramutation in maize.

Authors:  V L Chandler; W B Eggleston; J E Dorweiler
Journal:  Plant Mol Biol       Date:  2000-06       Impact factor: 4.076

4.  Paramutation, an allelic interaction, is associated with a stable and heritable reduction of transcription of the maize b regulatory gene.

Authors:  G I Patterson; C J Thorpe; V L Chandler
Journal:  Genetics       Date:  1993-11       Impact factor: 4.562

5.  A direct repeat sequence at the Rasgrf1 locus and imprinted expression.

Authors:  R S Pearsall; C Plass; M A Romano; M D Garrick; H Shibata; Y Hayashizaki; W A Held
Journal:  Genomics       Date:  1999-01-15       Impact factor: 5.736

6.  Transvection effects involving DNA methylation during meiosis in the mouse.

Authors:  Minoo Rassoulzadegan; Marc Magliano; François Cuzin
Journal:  EMBO J       Date:  2002-02-01       Impact factor: 11.598

7.  Loss of the maternal H19 gene induces changes in Igf2 methylation in both cis and trans.

Authors:  T Forné; J Oswald; W Dean; J R Saam; B Bailleul; L Dandolo; S M Tilghman; J Walter; W Reik
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-16       Impact factor: 11.205

8.  Interchromosomal transfer of epigenetic states in Ascobolus: transfer of DNA methylation is mechanistically related to homologous recombination.

Authors:  V Colot; L Maloisel; J L Rossignol
Journal:  Cell       Date:  1996-09-20       Impact factor: 41.582

9.  Methylation-specific PCR: a novel PCR assay for methylation status of CpG islands.

Authors:  J G Herman; J R Graff; S Myöhänen; B D Nelkin; S B Baylin
Journal:  Proc Natl Acad Sci U S A       Date:  1996-09-03       Impact factor: 11.205

10.  Differential chromatin structure within a tandem array 100 kb upstream of the maize b1 locus is associated with paramutation.

Authors:  Maike Stam; Christiane Belele; Jane E Dorweiler; Vicki L Chandler
Journal:  Genes Dev       Date:  2002-08-01       Impact factor: 11.361

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  31 in total

1.  Paramutation: the chromatin connection.

Authors:  Chris B Della Vedova; Karen C Cone
Journal:  Plant Cell       Date:  2004-06       Impact factor: 11.277

2.  DNA methylation affects meiotic trans-sensing, not meiotic silencing, in Neurospora.

Authors:  Robert J Pratt; Dong W Lee; Rodolfo Aramayo
Journal:  Genetics       Date:  2004-12       Impact factor: 4.562

3.  Rasgrf1 imprinting is regulated by a CTCF-dependent methylation-sensitive enhancer blocker.

Authors:  Bongjune Yoon; Herry Herman; Benjamin Hu; Yoon Jung Park; Anders Lindroth; Adam Bell; Adam G West; Yanjie Chang; Aimee Stablewski; Jessica C Piel; Dmitri I Loukinov; Victor V Lobanenkov; Paul D Soloway
Journal:  Mol Cell Biol       Date:  2005-12       Impact factor: 4.272

4.  Timing and sequence requirements defined for embryonic maintenance of imprinted DNA methylation at Rasgrf1.

Authors:  Rebecca Holmes; Yanjie Chang; Paul D Soloway
Journal:  Mol Cell Biol       Date:  2006-10-09       Impact factor: 4.272

Review 5.  Meiotic silencing and the epigenetics of sex.

Authors:  William G Kelly; Rodolfo Aramayo
Journal:  Chromosome Res       Date:  2007       Impact factor: 5.239

6.  The development of an Arabidopsis model system for genome-wide analysis of polyploidy effects.

Authors:  Z Jeffrey Chen; Jianlin Wang; Lu Tian; Hyeon-Se Lee; Jiyuan J Wang; Meng Chen; Jinsuk J Lee; Caroline Josefsson; Andreas Madlung; Brian Watson; Zach Lippman; Matt Vaughn; J Chris Pires; Vincent Colot; R W Doerge; Robert A Martienssen; Luca Comai; Thomas C Osborn
Journal:  Biol J Linn Soc Lond       Date:  2004-08       Impact factor: 2.138

Review 7.  Epigenetic inheritance of acquired traits through sperm RNAs and sperm RNA modifications.

Authors:  Qi Chen; Wei Yan; Enkui Duan
Journal:  Nat Rev Genet       Date:  2016-10-03       Impact factor: 53.242

Review 8.  The case for transgenerational epigenetic inheritance in humans.

Authors:  Daniel K Morgan; Emma Whitelaw
Journal:  Mamm Genome       Date:  2008-07-29       Impact factor: 2.957

9.  A non-coding RNA within the Rasgrf1 locus in mouse is imprinted and regulated by its homologous chromosome in trans.

Authors:  Chelsea M Brideau; Krista P Kauppinen; Rebecca Holmes; Paul D Soloway
Journal:  PLoS One       Date:  2010-11-02       Impact factor: 3.240

10.  10 reasons to be tantalized by the B73 maize genome.

Authors:  Virginia Walbot
Journal:  PLoS Genet       Date:  2009-11-20       Impact factor: 5.917

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