Literature DB >> 12736371

A simple electrostatic criterion for predicting the thermal stability of proteins.

Angel Mozo-Villarías1, Juan Cedano, Enrique Querol.   

Abstract

The enhancement of protein thermostability is an important issue for both basic science and biotechnology purposes. We have developed a thermostability criterion for a protein in terms of a quasi-electric dipole moment (contributed by its charged residues) defined for an electric charge distribution whose total charge is not zero. It was found that minimization of the modulus of this dipole moment increased its thermal stability, as demonstrated by surveying these values in pairs of mesostable-thermostable homologous proteins and in mutations described in the literature. The analysis of these observations provides criteria for thermostabilization of a protein, by computing its dipole profile. This profile is obtained by direct substitution of each amino acid of the sequence by either a positive, negative or neutral amino acid, followed by a recalculation of the dipole moment. As an experimental example, these criteria were applied to a beta-glucanase to enhance its thermal stability.

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Year:  2003        PMID: 12736371     DOI: 10.1093/proeng/gzg033

Source DB:  PubMed          Journal:  Protein Eng        ISSN: 0269-2139


  9 in total

1.  Vector description of electric and hydrophobic interactions in protein homodimers.

Authors:  Angel Mozo-Villarías; Juan Cedano; Enrique Querol
Journal:  Eur Biophys J       Date:  2015-12-11       Impact factor: 1.733

2.  Hydrophobicity density profiles to predict thermal stability enhancement in proteins.

Authors:  Angel Mozo-Villarías; Juan Cedano; Enrique Querol
Journal:  Protein J       Date:  2006-12       Impact factor: 2.371

3.  Study of the influence of temperature on the dynamics of the catalytic cleft in 1,3-1,4-beta-glucanase by molecular dynamics simulations.

Authors:  Raimundo Gargallo; Juan Cedano; Angel Mozo-Villarias; Enrique Querol; Baldomero Oliva
Journal:  J Mol Model       Date:  2006-03-09       Impact factor: 1.810

4.  Influence of pK(a) shifts on the calculated dipole moments of proteins.

Authors:  Brett L Mellor; Shiul Khadka; David D Busath; Brian A Mazzeo
Journal:  Protein J       Date:  2011-10       Impact factor: 2.371

5.  Impacts of the charged residues mutation S48E/N62H on the thermostability and unfolding behavior of cold shock protein: insights from molecular dynamics simulation with Gō model.

Authors:  Ji-Guo Su; Xiao-Ming Han; Shu-Xin Zhao; Yan-Xue Hou; Xing-Yuan Li; Li-Sheng Qi; Ji-Hua Wang
Journal:  J Mol Model       Date:  2016-03-28       Impact factor: 1.810

6.  A model of protein association based on their hydrophobic and electric interactions.

Authors:  Angel Mozo-Villarías; Juan Cedano; Enrique Querol
Journal:  PLoS One       Date:  2014-10-17       Impact factor: 3.240

7.  Insights on protein thermal stability: a graph representation of molecular interactions.

Authors:  Mattia Miotto; Pier Paolo Olimpieri; Lorenzo Di Rienzo; Francesco Ambrosetti; Pietro Corsi; Rosalba Lepore; Gian Gaetano Tartaglia; Edoardo Milanetti
Journal:  Bioinformatics       Date:  2019-08-01       Impact factor: 6.937

8.  Role of simple descriptors and applicability domain in predicting change in protein thermostability.

Authors:  Kenneth N McGuinness; Weilan Pan; Robert P Sheridan; Grant Murphy; Alejandro Crespo
Journal:  PLoS One       Date:  2018-09-07       Impact factor: 3.240

9.  A protein self-assembly model guided by electrostatic and hydrophobic dipole moments.

Authors:  Angel Mozo-Villarías; Enrique Querol
Journal:  PLoS One       Date:  2019-04-29       Impact factor: 3.240

  9 in total

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