Literature DB >> 12732144

Closing the folding chamber of the eukaryotic chaperonin requires the transition state of ATP hydrolysis.

Anne S Meyer1, Joel R Gillespie, Dirk Walther, Ian S Millet, Sebastian Doniach, Judith Frydman.   

Abstract

Chaperonins use ATPase cycling to promote conformational changes leading to protein folding. The prokaryotic chaperonin GroEL requires a cofactor, GroES, which serves as a "lid" enclosing substrates in the central cavity and confers an asymmetry on GroEL required for cooperative transitions driving the reaction. The eukaryotic chaperonin TRiC/CCT does not have such a cofactor but appears to have a "built-in" lid. Whether this seemingly symmetric chaperonin also operates through an asymmetric cycle is unclear. We show that unlike GroEL, TRiC does not close its lid upon nucleotide binding, but instead responds to the trigonal-bipyramidal transition state of ATP hydrolysis. Further, nucleotide analogs inducing this transition state confer an asymmetric conformation on TRiC. Similar to GroEL, lid closure in TRiC confines the substrates in the cavity and is essential for folding. Understanding the distinct mechanisms governing eukaryotic and bacterial chaperonin function may reveal how TRiC has evolved to fold specific eukaryotic proteins.

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Year:  2003        PMID: 12732144     DOI: 10.1016/s0092-8674(03)00307-6

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  82 in total

1.  TRiC/CCT cooperates with different upstream chaperones in the folding of distinct protein classes.

Authors:  Katja Siegers; Bettina Bölter; Juliane P Schwarz; Ulrike M K Böttcher; Suranjana Guha; F Ulrich Hartl
Journal:  EMBO J       Date:  2003-10-01       Impact factor: 11.598

2.  Role of the gamma-phosphate of ATP in triggering protein folding by GroEL-GroES: function, structure and energetics.

Authors:  Charu Chaudhry; George W Farr; Matthew J Todd; Hays S Rye; Axel T Brunger; Paul D Adams; Arthur L Horwich; Paul B Sigler
Journal:  EMBO J       Date:  2003-10-01       Impact factor: 11.598

3.  Substrate polypeptide presents a load on the apical domains of the chaperonin GroEL.

Authors:  Fumihiro Motojima; Charu Chaudhry; Wayne A Fenton; George W Farr; Arthur L Horwich
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-12       Impact factor: 11.205

4.  Trivalent arsenic inhibits the functions of chaperonin complex.

Authors:  Xuewen Pan; Stefanie Reissman; Nick R Douglas; Zhiwei Huang; Daniel S Yuan; Xiaoling Wang; J Michael McCaffery; Judith Frydman; Jef D Boeke
Journal:  Genetics       Date:  2010-07-26       Impact factor: 4.562

5.  Archaeal-like chaperonins in bacteria.

Authors:  Stephen M Techtmann; Frank T Robb
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-05       Impact factor: 11.205

Review 6.  Protein folding in the cytoplasm and the heat shock response.

Authors:  R Martin Vabulas; Swasti Raychaudhuri; Manajit Hayer-Hartl; F Ulrich Hartl
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-12       Impact factor: 10.005

7.  Crystal structure of the open conformation of the mammalian chaperonin CCT in complex with tubulin.

Authors:  Inés G Muñoz; Hugo Yébenes; Min Zhou; Pablo Mesa; Marina Serna; Ah Young Park; Elisabeth Bragado-Nilsson; Ana Beloso; Guillermo de Cárcer; Marcos Malumbres; Carol V Robinson; José M Valpuesta; Guillermo Montoya
Journal:  Nat Struct Mol Biol       Date:  2010-12-12       Impact factor: 15.369

8.  Structural transitions and thermodynamics of a glycine-dependent riboswitch from Vibrio cholerae.

Authors:  Jan Lipfert; Rhiju Das; Vincent B Chu; Madhuri Kudaravalli; Nathan Boyd; Daniel Herschlag; Sebastian Doniach
Journal:  J Mol Biol       Date:  2006-10-13       Impact factor: 5.469

9.  Comparative analysis of the protein folding activities of two chaperonin subunits of Thermococcus strain KS-1: the effects of beryllium fluoride.

Authors:  Takao Yoshida; Ryo Iizuka; Keisuke Itami; Takuo Yasunaga; Haruhiko Sakuraba; Toshihisa Ohshima; Masafumi Yohda; Tadashi Maruyama
Journal:  Extremophiles       Date:  2006-10-28       Impact factor: 2.395

10.  Football- and bullet-shaped GroEL-GroES complexes coexist during the reaction cycle.

Authors:  Tomoya Sameshima; Taro Ueno; Ryo Iizuka; Noriyuki Ishii; Naofumi Terada; Kohki Okabe; Takashi Funatsu
Journal:  J Biol Chem       Date:  2008-06-20       Impact factor: 5.157

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