Literature DB >> 12730601

Closing of the nucleotide pocket of kinesin-family motors upon binding to microtubules.

Nariman Naber1, Todd J Minehardt, Sarah Rice, Xiaoru Chen, Jean Grammer, Marija Matuska, Ronald D Vale, Peter A Kollman, Roberto Car, Ralph G Yount, Roger Cooke, Edward Pate.   

Abstract

We have used adenosine diphosphate analogs containing electron paramagnetic resonance (EPR) spin moieties and EPR spectroscopy to show that the nucleotide-binding site of kinesin-family motors closes when the motor.diphosphate complex binds to microtubules. Structural analyses demonstrate that a domain movement in the switch 1 region at the nucleotide site, homologous to domain movements in the switch 1 region in the G proteins [heterotrimeric guanine nucleotide-binding proteins], explains the EPR data. The switch movement primes the motor both for the free energy-yielding nucleotide hydrolysis reaction and for subsequent conformational changes that are crucial for the generation of force and directed motion along the microtubule.

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Year:  2003        PMID: 12730601     DOI: 10.1126/science.1082374

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  26 in total

1.  Multiple conformations of the nucleotide site of Kinesin family motors in the triphosphate state.

Authors:  Nariman Naber; Adam Larson; Sarah Rice; Roger Cooke; Edward Pate
Journal:  J Mol Biol       Date:  2011-01-26       Impact factor: 5.469

2.  What kinesin does at roadblocks: the coordination mechanism for molecular walking.

Authors:  Isabelle M-T C Crevel; Miklós Nyitrai; María C Alonso; Stefan Weiss; Michael A Geeves; Robert A Cross
Journal:  EMBO J       Date:  2003-12-18       Impact factor: 11.598

3.  A comparative study of motor-protein motions by using a simple elastic-network model.

Authors:  Wenjun Zheng; Sebastian Doniach
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-29       Impact factor: 11.205

4.  Kinesin's second step.

Authors:  Lisa M Klumpp; Andreas Hoenger; Susan P Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-25       Impact factor: 11.205

5.  The loop 5 element structurally and kinetically coordinates dimers of the human kinesin-5, Eg5.

Authors:  Joshua S Waitzman; Adam G Larson; Jared C Cochran; Nariman Naber; Roger Cooke; F Jon Kull; Edward Pate; Sarah E Rice
Journal:  Biophys J       Date:  2011-12-07       Impact factor: 4.033

6.  Nucleotide pocket thermodynamics measured by EPR reveal how energy partitioning relates myosin speed to efficiency.

Authors:  Thomas J Purcell; Nariman Naber; Kathy Franks-Skiba; Alexander R Dunn; Catherine C Eldred; Christopher L Berger; András Málnási-Csizmadia; James A Spudich; Douglas M Swank; Edward Pate; Roger Cooke
Journal:  J Mol Biol       Date:  2010-12-23       Impact factor: 5.469

7.  Probing the local dynamics of nucleotide-binding pocket coupled to the global dynamics: myosin versus kinesin.

Authors:  Wenjun Zheng; Bernard R Brooks
Journal:  Biophys J       Date:  2005-05-06       Impact factor: 4.033

8.  Backsteps induced by nucleotide analogs suggest the front head of kinesin is gated by strain.

Authors:  Nicholas R Guydosh; Steven M Block
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-12       Impact factor: 11.205

9.  Reversible movement of switch 1 loop of myosin determines actin interaction.

Authors:  Bálint Kintses; Máté Gyimesi; David S Pearson; Michael A Geeves; Wei Zeng; Clive R Bagshaw; András Málnási-Csizmadia
Journal:  EMBO J       Date:  2007-01-10       Impact factor: 11.598

10.  High-resolution cryo-EM maps show the nucleotide binding pocket of KIF1A in open and closed conformations.

Authors:  Masahide Kikkawa; Nobutaka Hirokawa
Journal:  EMBO J       Date:  2006-08-31       Impact factor: 11.598

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