Literature DB >> 12720321

OPEP: a tool for the optimal partitioning of electric properties.

János G Angyán1, Christophe Chipot, François Dehez, Christof Hättig, Georg Jansen, Claude Millot.   

Abstract

OPEP is a suite of FORTRAN programs targeted at the optimal partitioning of molecular electric properties. It includes an interactive module for the construction of Cartesian grids of points, on which either the molecular electrostatic potential or the induction energy is mapped. The generation of distributed multipoles and polarizabilities is achieved using either the formalism of the normal equations of the least-squares problem, which restates the fitting procedure in terms of simple matrix operations, or a statistical approach, which provides a pictorial description of the distributed models of multipoles and polarizabilities, thereby allowing the pinpointing of pathological cases. Molecular symmetry is accounted for by means of local atomic frames, which are generated in an automated fashion. A Tcl/Tk graphical user interface wraps the suite of programs, thereby making OPEP a user-friendly package for building models of distributed multipoles and polarizabilities. OPEP is an open-source suite of programs distributed free of charge under the GNU general public license (GPL) at http://www.lctn.uhp-nancy.fr/Opep. Copyright 2003 Wiley Periodicals, Inc. J Comput Chem 24: 997-1008, 2003

Year:  2003        PMID: 12720321     DOI: 10.1002/jcc.10236

Source DB:  PubMed          Journal:  J Comput Chem        ISSN: 0192-8651            Impact factor:   3.376


  7 in total

1.  HPAM: Hirshfeld Partitioned Atomic Multipoles.

Authors:  Dennis M Elking; Lalith Perera; Lee G Pedersen
Journal:  Comput Phys Commun       Date:  2012-02-01       Impact factor: 4.390

2.  Generalization of the Gaussian electrostatic model: extension to arbitrary angular momentum, distributed multipoles, and speedup with reciprocal space methods.

Authors:  G Andrés Cisneros; Jean-Philip Piquemal; Thomas A Darden
Journal:  J Chem Phys       Date:  2006-11-14       Impact factor: 3.488

3.  Gaussian induced dipole polarization model.

Authors:  Dennis Elking; Tom Darden; Robert J Woods
Journal:  J Comput Chem       Date:  2007-05       Impact factor: 3.376

4.  Gaussian Multipole Model (GMM).

Authors:  Dennis M Elking; G Andrés Cisneros; Jean-Philip Piquemal; Thomas A Darden; Lee G Pedersen
Journal:  J Chem Theory Comput       Date:  2010       Impact factor: 6.006

5.  Atomic forces for geometry-dependent point multipole and gaussian multipole models.

Authors:  Dennis M Elking; Lalith Perera; Robert Duke; Thomas Darden; Lee G Pedersen
Journal:  J Comput Chem       Date:  2010-11-30       Impact factor: 3.376

6.  Polarizable intermolecular potentials for water and benzene interacting with halide and metal ions.

Authors:  Fabien Archambault; Christophe Chipot; Ignacio Soteras; F Javier Luque; Klaus Schulten; François Dehez
Journal:  J Chem Theory Comput       Date:  2009-01-01       Impact factor: 6.006

7.  Anisotropic, Polarizable Molecular Mechanics Studies of Inter- and Intramolecular Interactions and Ligand-Macromolecule Complexes. A Bottom-Up Strategy.

Authors:  Nohad Gresh; G Andrés Cisneros; Thomas A Darden; Jean-Philip Piquemal
Journal:  J Chem Theory Comput       Date:  2007-11       Impact factor: 6.006

  7 in total

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