Literature DB >> 12718881

Structural and mechanistic basis of pre- and posttransfer editing by leucyl-tRNA synthetase.

Tommie L Lincecum1, Michael Tukalo, Anna Yaremchuk, Richard S Mursinna, Amy M Williams, Brian S Sproat, Wendy Van Den Eynde, Andreas Link, Serge Van Calenbergh, Morten Grøtli, Susan A Martinis, Stephen Cusack.   

Abstract

The aminoacyl-tRNA synthetases link tRNAs with their cognate amino acid. In some cases, their fidelity relies on hydrolytic editing that destroys incorrectly activated amino acids or mischarged tRNAs. We present structures of leucyl-tRNA synthetase complexed with analogs of the distinct pre- and posttransfer editing substrates. The editing active site binds the two different substrates using a single amino acid discriminatory pocket while preserving the same mode of adenine recognition. This suggests a similar mechanism of hydrolysis for both editing substrates that depends on a key, completely conserved aspartic acid, which interacts with the alpha-amino group of the noncognate amino acid and positions both substrates for hydrolysis. Our results demonstrate the economy by which a single active site accommodates two distinct substrates in a proofreading process critical to the fidelity of protein synthesis.

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Year:  2003        PMID: 12718881     DOI: 10.1016/s1097-2765(03)00098-4

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  95 in total

1.  Two distinct domains of the beta subunit of Aquifex aeolicus leucyl-tRNA synthetase are involved in tRNA binding as revealed by a three-hybrid selection.

Authors:  Yong-Gang Zheng; Hui Wei; Chen Ling; Franck Martin; Gilbert Eriani; En-Duo Wang
Journal:  Nucleic Acids Res       Date:  2004-06-18       Impact factor: 16.971

2.  Kinetic partitioning between synthetic and editing pathways in class I aminoacyl-tRNA synthetases occurs at both pre-transfer and post-transfer hydrolytic steps.

Authors:  Nevena Cvetesic; John J Perona; Ita Gruic-Sovulj
Journal:  J Biol Chem       Date:  2012-05-30       Impact factor: 5.157

3.  Partitioning of tRNA-dependent editing between pre- and post-transfer pathways in class I aminoacyl-tRNA synthetases.

Authors:  Morana Dulic; Nevena Cvetesic; John J Perona; Ita Gruic-Sovulj
Journal:  J Biol Chem       Date:  2010-05-24       Impact factor: 5.157

4.  Proofreading in translation: dynamics of the double-sieve model.

Authors:  Dino Moras
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-13       Impact factor: 11.205

5.  Mechanistic insights into cognate substrate discrimination during proofreading in translation.

Authors:  Tanweer Hussain; Venu Kamarthapu; Shobha P Kruparani; Mandar V Deshmukh; Rajan Sankaranarayanan
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-22       Impact factor: 11.205

6.  Aminoacyl transfer rate dictates choice of editing pathway in threonyl-tRNA synthetase.

Authors:  Anand Minajigi; Christopher S Francklyn
Journal:  J Biol Chem       Date:  2010-05-26       Impact factor: 5.157

7.  The mechanism of pre-transfer editing in yeast mitochondrial threonyl-tRNA synthetase.

Authors:  Jiqiang Ling; Kaitlyn M Peterson; Ivana Simonovic; Dieter Söll; Miljan Simonovic
Journal:  J Biol Chem       Date:  2012-07-06       Impact factor: 5.157

8.  C-terminal Domain of Leucyl-tRNA Synthetase from Pathogenic Candida albicans Recognizes both tRNASer and tRNALeu.

Authors:  Quan-Quan Ji; Zhi-Peng Fang; Qing Ye; Zhi-Rong Ruan; Xiao-Long Zhou; En-Duo Wang
Journal:  J Biol Chem       Date:  2015-12-16       Impact factor: 5.157

9.  Degenerate connective polypeptide 1 (CP1) domain from human mitochondrial leucyl-tRNA synthetase.

Authors:  Qing Ye; Meng Wang; Zhi-Peng Fang; Zhi-Rong Ruan; Quan-Quan Ji; Xiao-Long Zhou; En-Duo Wang
Journal:  J Biol Chem       Date:  2015-08-13       Impact factor: 5.157

10.  Aminoacylation of tRNA 2'- or 3'-hydroxyl by phosphoseryl- and pyrrolysyl-tRNA synthetases.

Authors:  Markus Englert; Sarath Moses; Michael Hohn; Jiqiang Ling; Patrick O'Donoghue; Dieter Söll
Journal:  FEBS Lett       Date:  2013-09-08       Impact factor: 4.124

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