Literature DB >> 12717633

A whole-genome screen of a quantitative trait of age-related maculopathy in sibships from the Beaver Dam Eye Study.

James H Schick1, Sudha K Iyengar, Barbara E Klein, Ronald Klein, Karlie Reading, Rachel Liptak, Christopher Millard, Kristine E Lee, Sandra C Tomany, Emily L Moore, Bonnie A Fijal, Robert C Elston.   

Abstract

Age-related maculopathy (ARM) is a leading cause of visual impairment among the elderly in Western populations. To identify ARM-susceptibility loci, we genotyped a subset of subjects from the Beaver Dam (WI) Eye Study and performed a model-free genomewide linkage analysis for markers linked to a quantitative measure of ARM. We initially genotyped 345 autosomal markers in 325 individuals (N=263 sib pairs) from 102 pedigrees. Ten regions suggestive of linkage with ARM were observed on chromosomes 3, 5, 6, 12, 15, and 16. Prior to fine mapping, the most significant regions were an 18-cM region on chromosome 12, near D12S1300 (P=.0159); a region on chromosome 3, near D3S1763, with a P value of.0062; and a 6-cM region on chromosome 16, near D16S769, with a P value of.0086. After expanding our analysis to include 25 additional fine-mapping markers, we found that a 14-cM region on chromosome 12, near D12S346 (located at 106.89 cM), showed the strongest indication of linkage, with a P value of.004. Three other regions, on chromosomes 5, 6, and 15, that were nominally significant at P< or =.01 are also appropriate for fine mapping.

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Year:  2003        PMID: 12717633      PMCID: PMC1180302          DOI: 10.1086/375500

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  56 in total

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Authors:  J M Olson
Journal:  Am J Hum Genet       Date:  1999-12       Impact factor: 11.025

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Review 3.  Mitochondrial control of cell death.

Authors:  G Kroemer; J C Reed
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4.  A full genome scan for age-related maculopathy.

Authors:  D E Weeks; Y P Conley; T S Mah; T O Paul; L Morse; J Ngo-Chang; J P Dailey; R E Ferrell; M B Gorin
Journal:  Hum Mol Genet       Date:  2000-05-22       Impact factor: 6.150

5.  ABCR gene analysis in familial exudative age-related macular degeneration.

Authors:  E H Souied; D Ducroq; J M Rozet; S Gerber; I Perrault; A Munnich; G Coscas; G Soubrane; J Kaplan
Journal:  Invest Ophthalmol Vis Sci       Date:  2000-01       Impact factor: 4.799

6.  Mitochondrio-nuclear translocation of AIF in apoptosis and necrosis.

Authors:  E Daugas; S A Susin; N Zamzami; K F Ferri; T Irinopoulou; N Larochette; M C Prévost; B Leber; D Andrews; J Penninger; G Kroemer
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Review 7.  Genetic susceptibility to age related macular degeneration.

Authors:  J R Yates; A T Moore
Journal:  J Med Genet       Date:  2000-02       Impact factor: 6.318

8.  The human plasma glutathione peroxidase-encoding gene: organization, sequence and localization to chromosome 5q32.

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Authors:  H A Kahn; H M Leibowitz; J P Ganley; M M Kini; T Colton; R S Nickerson; T R Dawber
Journal:  Am J Epidemiol       Date:  1977-07       Impact factor: 4.897

10.  The relationship of age-related maculopathy, cataract, and glaucoma to visual acuity.

Authors:  R Klein; Q Wang; B E Klein; S E Moss; S M Meuer
Journal:  Invest Ophthalmol Vis Sci       Date:  1995-01       Impact factor: 4.799

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  36 in total

Review 1.  Epidemiology of age-related maculopathy: a review.

Authors:  Redmer van Leeuwen; Caroline C W Klaver; Johannes R Vingerling; Albert Hofman; Paulus T V M de Jong
Journal:  Eur J Epidemiol       Date:  2003       Impact factor: 8.082

2.  Dissection of genomewide-scan data in extended families reveals a major locus and oligogenic susceptibility for age-related macular degeneration.

Authors:  Sudha K Iyengar; Danhong Song; Barbara E K Klein; Ronald Klein; James H Schick; Jennifer Humphrey; Christopher Millard; Rachel Liptak; Karlie Russo; Gyungah Jun; Kristine E Lee; Bonnie Fijal; Robert C Elston
Journal:  Am J Hum Genet       Date:  2003-12-19       Impact factor: 11.025

3.  Age-related maculopathy: a genomewide scan with continued evidence of susceptibility loci within the 1q31, 10q26, and 17q25 regions.

Authors:  Daniel E Weeks; Yvette P Conley; Hui-Ju Tsai; Tammy S Mah; Silke Schmidt; Eric A Postel; Anita Agarwal; Jonathan L Haines; Margaret A Pericak-Vance; Philip J Rosenfeld; T Otis Paul; Andrew W Eller; Lawrence S Morse; J P Dailey; Robert E Ferrell; Michael B Gorin
Journal:  Am J Hum Genet       Date:  2004-05-27       Impact factor: 11.025

Review 4.  Genetic factors of age-related macular degeneration.

Authors:  Jingsheng Tuo; Christine M Bojanowski; Chi-Chao Chan
Journal:  Prog Retin Eye Res       Date:  2004-03       Impact factor: 21.198

5.  Age-related macular degeneration: a high-resolution genome scan for susceptibility loci in a population enriched for late-stage disease.

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Journal:  Am J Hum Genet       Date:  2004-02-16       Impact factor: 11.025

6.  Dissection of chromosome 16p12 linkage peak suggests a possible role for CACNG3 variants in age-related macular degeneration susceptibility.

Authors:  Kylee L Spencer; Lana M Olson; Nathalie Schnetz-Boutaud; Paul Gallins; Gaofeng Wang; William K Scott; Anita Agarwal; Johanna Jakobsdottir; Yvette Conley; Daniel E Weeks; Michael B Gorin; Margaret A Pericak-Vance; Jonathan L Haines
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Review 7.  LOC387715/HTRA1 gene polymorphisms and susceptibility to age-related macular degeneration: A HuGE review and meta-analysis.

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8.  Susceptibility genes for age-related maculopathy on chromosome 10q26.

Authors:  Johanna Jakobsdottir; Yvette P Conley; Daniel E Weeks; Tammy S Mah; Robert E Ferrell; Michael B Gorin
Journal:  Am J Hum Genet       Date:  2005-07-26       Impact factor: 11.025

Review 9.  The role of inflammation in the pathogenesis of age-related macular degeneration.

Authors:  Larry A Donoso; David Kim; Arcilee Frost; Alston Callahan; Gregory Hageman
Journal:  Surv Ophthalmol       Date:  2006 Mar-Apr       Impact factor: 6.048

10.  HTRA1 variants in exudative age-related macular degeneration and interactions with smoking and CFH.

Authors:  Pancy O S Tam; Tsz Kin Ng; David T L Liu; Wai Man Chan; Sylvia W Y Chiang; Li Jia Chen; Andrew DeWan; Josephine Hoh; Dennis S C Lam; Chi Pui Pang
Journal:  Invest Ophthalmol Vis Sci       Date:  2008-03-03       Impact factor: 4.799

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