Literature DB >> 12710669

Genome-wide mapping of protein-DNA interactions by chromatin immunoprecipitation and DNA microarray hybridization.

Jason D Lieb1.   

Abstract

Mesh：

Substances：

Year:  2003        PMID： 12710669     DOI： 10.1385/1-59259-364-X:99

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN： 1064-3745


× No keyword cloud information.
  12 in total

1.  Using formaldehyde-assisted isolation of regulatory elements (FAIRE) to isolate active regulatory DNA.

Authors:  Jeremy M Simon; Paul G Giresi; Ian J Davis; Jason D Lieb
Journal:  Nat Protoc       Date:  2012-01-19       Impact factor: 13.491

2.  Condensin binding at distinct and specific chromosomal sites in the Saccharomyces cerevisiae genome.

Authors:  Bi-Dar Wang; David Eyre; Munira Basrai; Michael Lichten; Alexander Strunnikov
Journal:  Mol Cell Biol       Date:  2005-08       Impact factor: 4.272

Review 3.  Applying whole-genome studies of epigenetic regulation to study human disease.

Authors:  J D Lieb; S Beck; M L Bulyk; P Farnham; N Hattori; S Henikoff; X S Liu; K Okumura; K Shiota; T Ushijima; J M Greally
Journal:  Cytogenet Genome Res       Date:  2006       Impact factor: 1.636

4.  Chromatin immunoprecipitation and microarray-based analysis of protein location.

Authors:  Tong Ihn Lee; Sarah E Johnstone; Richard A Young
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

5.  Bayesian network analysis of targeting interactions in chromatin.

Authors:  Bas van Steensel; Ulrich Braunschweig; Guillaume J Filion; Menzies Chen; Joke G van Bemmel; Trey Ideker
Journal:  Genome Res       Date:  2009-12-09       Impact factor: 9.043

6.  Changes in genomewide occupancy of core transcriptional regulators during heat stress.

Authors:  Sara J Zanton; B Franklin Pugh
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-17       Impact factor: 11.205

7.  ChIPOTle: a user-friendly tool for the analysis of ChIP-chip data.

Authors:  Michael J Buck; Andrew B Nobel; Jason D Lieb
Journal:  Genome Biol       Date:  2005-10-19       Impact factor: 13.583

8.  Analysis of promoter regions of co-expressed genes identified by microarray analysis.

Authors:  Srinivas Veerla; Mattias Höglund
Journal:  BMC Bioinformatics       Date:  2006-08-17       Impact factor: 3.169

9.  Exhaustive search for over-represented DNA sequence motifs with CisFinder.

Authors:  Alexei A Sharov; Minoru S H Ko
Journal:  DNA Res       Date:  2009-09-09       Impact factor: 4.458

10.  Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data.

Authors:  Anton Valouev; David S Johnson; Andreas Sundquist; Catherine Medina; Elizabeth Anton; Serafim Batzoglou; Richard M Myers; Arend Sidow
Journal:  Nat Methods       Date:  2008-09       Impact factor: 28.547
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.