Literature DB >> 12706850

An algorithm for neurite outgrowth reconstruction.

Christina M Weaver1, John D Pinezich, W Brent Lindquist, Marcelo E Vazquez.   

Abstract

We present a numerical method which provides the ability to analyze digitized microscope images of retinal explants and quantify neurite outgrowth. Few parameters are required as input and limited user interaction is necessary to process an entire experiment of images. This eliminates fatigue related errors and user-related bias common to manual analysis. The method does not rely on stained images and handles images of variable quality. The algorithm is used to determine time and dose dependent, in vitro, neurotoxic effects of 1 GeV per nucleon iron particles in retinal explants. No neurotoxic effects are detected until 72 h after exposure; at 72 h, significant reductions of neurite outgrowth occurred at doses higher than 10 cGy.

Entities:  

Keywords:  NASA Discipline Radiation Health; NASA Program Biomedical Research and Countermeasures; Non-NASA Center

Mesh:

Year:  2003        PMID: 12706850     DOI: 10.1016/s0165-0270(03)00017-7

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  10 in total

1.  NeuronMetrics: software for semi-automated processing of cultured neuron images.

Authors:  Martha L Narro; Fan Yang; Robert Kraft; Carola Wenk; Alon Efrat; Linda L Restifo
Journal:  Brain Res       Date:  2007-01-31       Impact factor: 3.252

2.  A rapid, quantitative method for assessing axonal extension on biomaterial platforms.

Authors:  Jared M Cregg; Sherri L Wiseman; Nicole M Pietrzak-Goetze; Martyn R Smith; David B Jaroch; Daniel C Clupper; Ryan J Gilbert
Journal:  Tissue Eng Part C Methods       Date:  2010-04       Impact factor: 3.056

3.  Evaluation of neurite outgrowth anisotropy using a novel application of circular analysis.

Authors:  Grace NgaYin Li; Diane Hoffman-Kim
Journal:  J Neurosci Methods       Date:  2008-07-11       Impact factor: 2.390

4.  A role for synaptotagmin VII-regulated exocytosis of lysosomes in neurite outgrowth from primary sympathetic neurons.

Authors:  Rosa M E Arantes; Norma W Andrews
Journal:  J Neurosci       Date:  2006-04-26       Impact factor: 6.167

5.  Soma Detection in 3D Images of Neurons using Machine Learning Technique.

Authors:  Guan-Wei He; Ting-Yuan Wang; Ann-Shyn Chiang; Yu-Tai Ching
Journal:  Neuroinformatics       Date:  2018-01

6.  Neuropilin 1-Sema signaling regulates crossing of cingulate pioneering axons during development of the corpus callosum.

Authors:  Michael Piper; Céline Plachez; Oressia Zalucki; Thomas Fothergill; Guy Goudreau; Reha Erzurumlu; Chenghua Gu; Linda J Richards
Journal:  Cereb Cortex       Date:  2009-04-08       Impact factor: 5.357

7.  A rapid, inexpensive high throughput screen method for neurite outgrowth.

Authors:  Susan T Yeyeodu; Sam M Witherspoon; Nailya Gilyazova; Gordon C Ibeanu
Journal:  Curr Chem Genomics       Date:  2010-12-13

8.  Automated detection of soma location and morphology in neuronal network cultures.

Authors:  Burcin Ozcan; Pooran Negi; Fernanda Laezza; Manos Papadakis; Demetrio Labate
Journal:  PLoS One       Date:  2015-04-08       Impact factor: 3.240

9.  Automated and accurate detection of soma location and surface morphology in large-scale 3D neuron images.

Authors:  Cheng Yan; Anan Li; Bin Zhang; Wenxiang Ding; Qingming Luo; Hui Gong
Journal:  PLoS One       Date:  2013-04-24       Impact factor: 3.240

10.  Automated sorting of neuronal trees in fluorescent images of neuronal networks using NeuroTreeTracer.

Authors:  Cihan Kayasandik; Pooran Negi; Fernanda Laezza; Manos Papadakis; Demetrio Labate
Journal:  Sci Rep       Date:  2018-04-24       Impact factor: 4.379

  10 in total

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