Literature DB >> 12700169

Conserved methylation imprints in the human and mouse GRB10 genes with divergent allelic expression suggests differential reading of the same mark.

Philippe Arnaud1, David Monk, Megan Hitchins, Emma Gordon, Wendy Dean, Colin V Beechey, Jo Peters, William Craigen, Michael Preece, Philip Stanier, Gudrun E Moore, Gavin Kelsey.   

Abstract

Grb10/GRB10 encodes a cytoplasmic adapter protein which modulates coupling of a number of cell surface receptor tyrosine kinases with specific signalling pathways. Mouse Grb10 is an imprinted gene with maternal-specific expression. In contrast, human GRB10 is expressed biallelically in most tissues, except for maternal-specific expression of one isoform in muscle and paternal expression in fetal brain. Owing to its location in 7p11.2-p12, GRB10 has been considered a candidate gene for the imprinted growth disorder, the Silver-Russell syndrome (SRS), but its predominantly biallelic expression argues against involvement in the syndrome. To investigate the discrepant imprinting between mouse and human, we compared the sequence organization of their upstream regions, and examined their allelic methylation patterns and the splice variant organization of the mouse locus. Contrary to expectation, we detected both maternal and paternal expression of mouse Grb10. Expression of the paternal allele arises from a different promoter region than the maternal and, as in human, is restricted to the brain. The upstream regions are well conserved, especially the presence of two CpG islands. Surprisingly, both genes have a similar imprinted methylation pattern, the second CpG island is a differentially methylated region (DMR) with maternal methylation in both species. Analysis of 24 SRS patients did not reveal methylation anomalies in the DMR. In the mouse this DMR is a gametic methylation mark. Our results suggest that the difference in imprinted expression in mouse and human is not due to acquisition of an imprint mark but in differences in the reading of this mark.

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Year:  2003        PMID: 12700169     DOI: 10.1093/hmg/ddg110

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  60 in total

Review 1.  Tissue-specific regulation and function of Grb10 during growth and neuronal commitment.

Authors:  Robert N Plasschaert; Marisa S Bartolomei
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-03       Impact factor: 11.205

2.  Genomic imprinting and epigenetic control of development.

Authors:  Andrew Fedoriw; Joshua Mugford; Terry Magnuson
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-07-01       Impact factor: 10.005

3.  A small family of sushi-class retrotransposon-derived genes in mammals and their relation to genomic imprinting.

Authors:  Neil A Youngson; Sylvia Kocialkowski; Nina Peel; Anne C Ferguson-Smith
Journal:  J Mol Evol       Date:  2005-09-12       Impact factor: 2.395

Review 4.  Child health, developmental plasticity, and epigenetic programming.

Authors:  Z Hochberg; R Feil; M Constancia; M Fraga; C Junien; J-C Carel; P Boileau; Y Le Bouc; C L Deal; K Lillycrop; R Scharfmann; A Sheppard; M Skinner; M Szyf; R A Waterland; D J Waxman; E Whitelaw; K Ong; K Albertsson-Wikland
Journal:  Endocr Rev       Date:  2010-10-22       Impact factor: 19.871

5.  Modifiers of epigenetic reprogramming show paternal effects in the mouse.

Authors:  Suyinn Chong; Nicola Vickaryous; Alyson Ashe; Natasha Zamudio; Neil Youngson; Sarah Hemley; Tomas Stopka; Arthur Skoultchi; Jacqui Matthews; Hamish S Scott; David de Kretser; Moira O'Bryan; Marnie Blewitt; Emma Whitelaw
Journal:  Nat Genet       Date:  2007-04-22       Impact factor: 38.330

6.  A maternal hypomethylation syndrome presenting as transient neonatal diabetes mellitus.

Authors:  D J G Mackay; S E Boonen; J Clayton-Smith; J Goodship; J M D Hahnemann; S G Kant; P R Njølstad; N H Robin; D O Robinson; R Siebert; J P H Shield; H E White; I K Temple
Journal:  Hum Genet       Date:  2006-07-01       Impact factor: 4.132

7.  Monoallelic loss of the imprinted gene Grb10 promotes tumor formation in irradiated Nf1+/- mice.

Authors:  Rana Mroue; Brian Huang; Steve Braunstein; Ari J Firestone; Jean L Nakamura
Journal:  PLoS Genet       Date:  2015-05-22       Impact factor: 5.917

Review 8.  The importance of imprinting in the human placenta.

Authors:  Jennifer M Frost; Gudrun E Moore
Journal:  PLoS Genet       Date:  2010-07-01       Impact factor: 5.917

9.  Evaluation of allelic expression of imprinted genes in adult human blood.

Authors:  Jennifer M Frost; Dave Monk; Taita Stojilkovic-Mikic; Kathryn Woodfine; Lyn S Chitty; Adele Murrell; Philip Stanier; Gudrun E Moore
Journal:  PLoS One       Date:  2010-10-21       Impact factor: 3.240

10.  Genomic organization and control of the grb7 gene family.

Authors:  E Lucas-Fernández; I García-Palmero; A Villalobo
Journal:  Curr Genomics       Date:  2008-03       Impact factor: 2.236

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